Parabacteroides merdae: INE87_02806
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Entry
INE87_02806 CDS
T07751
Name
(GenBank) putative RNA polymerase sigma factor FecI
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pmer
Parabacteroides merdae
Pathway
pmer02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pmer00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
INE87_02806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmer03021
]
INE87_02806
Transcription machinery [BR:
pmer03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
INE87_02806
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
Sigma70_ECF
HTH_38
HTH_40
HTH_11
HTH_23
HTH_24
HTH_10
HTH_25
HTH_20
PF0610-like_N
HTH_17
HTH_28
wHTH_Par
HTH_36
Xre-like-HTH
HTH_29
RPA_C
Motif
Other DBs
NCBI-ProteinID:
QUT50315
LinkDB
All DBs
Position
complement(3409103..3409657)
Genome browser
AA seq
184 aa
AA seq
DB search
MDINLESKYLEELGKGDHKAFDMLYIQYSPRLKHFLTGFIKNRDEASDMTQDIFYKIWTN
RETISKVDSFKAYLFRMARNMIYDYYEHSLIEENYQQKEQRRSTYDDLIEEELYARELSL
LIDIAVEKMPPQRRNIFIMSRKDGLSNEEIAQRLNISKRTVENHMTQALAELRKIAYSTL
LLFF
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atggatatcaaccttgagtcaaaatatctggaagaacttggaaagggggatcataaagcc
ttcgatatgctttacatccaatacagtccaagactaaagcacttcttaacaggtttcata
aagaatcgggatgaagcgagcgacatgacccaagatatcttctataaaatctggaccaac
cgggaaacgatctcaaaagtagattcttttaaggcctatctcttccgcatggcccgcaac
atgatctatgattattacgaacacagcctgatcgaagaaaactaccagcaaaaagagcaa
agaagatcgacctacgacgatctgatagaagaagaactctacgccagggagctatcgctg
ctcattgacattgctgtcgagaagatgccgcctcaacgccggaacatctttattatgagc
cggaaagatggcctgagcaatgaagaaatcgcccaacggctgaatatcagcaaacggaca
gtagaaaaccacatgacacaagcccttgccgaattgcggaagatcgcatattccactttg
ctgctttttttctga
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integrated database retrieval system
