Parabacteroides merdae: INE87_02864
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Entry
INE87_02864 CDS
T07751
Symbol
trpB_2
Name
(GenBank) Tryptophan synthase beta chain
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
pmer
Parabacteroides merdae
Pathway
pmer00260
Glycine, serine and threonine metabolism
pmer00400
Phenylalanine, tyrosine and tryptophan biosynthesis
pmer01100
Metabolic pathways
pmer01110
Biosynthesis of secondary metabolites
pmer01230
Biosynthesis of amino acids
Module
pmer_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
pmer00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
INE87_02864 (trpB_2)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
INE87_02864 (trpB_2)
Enzymes [BR:
pmer01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
INE87_02864 (trpB_2)
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Gene cluster
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Motif
Pfam:
PALP
TPP_enzyme_M
OpuAC
Motif
Other DBs
NCBI-ProteinID:
QUT50373
LinkDB
All DBs
Position
complement(3488489..3489853)
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AA seq
454 aa
AA seq
DB search
MESKKFLLQEKDIPTAWYNIVADMENKPLPPLNPKTKEPLKPEDLYPLFAKGLVDQEMNQ
TDAWIEIPEEVRDMYKIWRPTPLVRAYGLEKALDTPAHIYFKNESVSPVGSHKLNSAIPQ
AYFCKKEGVTNVTTETGAGQWGASMAMAAKHFGLELAVYMVKVSYNQKPYRRSIMQTFGA
EVIASPSMSTRAGRDIITKHPNYQGSLGTAISEAVELAMQTPNCKYVLGSVLNHVMLHQT
VIGLEAEKQMEMAGEYPDVVIACFGGGSNFSGIAFPFLRHKLTQGKNIRIVAAEPASCPK
LTRGQFQYDFGDEAGYTPLLPMFTLGHNFAPANIHAGGLRYHGAGSIVSQLKKDGLMDAV
DIQQLETFKAATLFAQSEGIIPAPESSHAIAAAIREAEQAKIEGKPRTILFNLSGHGLID
MAAYDQYLAGDLTNYEVTDADVEKNLSEIEKIIK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtaagaaatttttactgcaggagaaagatattcctacagcctggtacaacatc
gtagcagacatggagaataaaccgcttcctccgctcaaccccaaaacaaaggaaccgctc
aagcctgaagatctctatcctctatttgccaaaggattggtagaccaggagatgaaccag
acggatgcctggatcgaaatcccggaagaagttcgcgacatgtataaaatctggcgtccg
actccgttggtccgcgcttacggacttgaaaaagcactcgacacgccggctcacatctac
ttcaagaacgaaagtgtcagccctgtcggatctcataaactgaattccgctattccgcag
gcctatttctgcaaaaaggaaggcgtgaccaatgtcacgaccgaaacaggcgccggacaa
tggggagcttccatggctatggccgccaaacatttcggattggaactggctgtctatatg
gtaaaggtcagctacaaccagaaaccctaccgccgttctatcatgcagacgttcggagcc
gaggtgatcgcctcgcccagtatgagtacacgtgcgggccgcgacattatcaccaagcac
ccgaattatcagggaagcctgggaacagccatctccgaagcggtcgagttggctatgcag
acgcccaattgcaaatatgtattgggtagcgtgctgaaccatgtgatgctccaccagaca
gttatcggcctggaagctgaaaaacaaatggagatggcgggagaatacccggacgtagtt
atcgcttgtttcggtggtggttcaaacttctccggtattgcattcccattcctgcgtcat
aagctgacacaaggaaaaaatatccgtatcgtggctgccgaaccggcctcctgcccgaaa
ctgacacgtggacaattccagtacgacttcggtgacgaagccggctacacgccactgctt
ccgatgttcactttagggcataacttcgccccggccaatatacacgcaggcggtctgcgt
tatcacggtgcaggttctatcgtcagccaattaaagaaagacggcctgatggatgctgta
gatatccagcagcttgaaacattcaaagctgccacgttattcgctcagagcgaaggcatt
ataccggcacccgaatcttcccacgctatcgctgccgctattcgcgaagcagagcaggct
aaaatcgaaggcaaaccacgtacgatcctgttcaacctgtccggtcacggcttgatcgac
atggccgcttacgaccagtatctggcaggcgacctgacaaactacgaagtcacagacgcc
gatgtagagaagaatctttcggaaatagagaagatcattaaataa
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