Parabacteroides merdae: INE87_02906
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Entry
INE87_02906 CDS
T07751
Name
(GenBank) Sigma-70, region 4
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pmer
Parabacteroides merdae
Pathway
pmer02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pmer00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
INE87_02906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmer03021
]
INE87_02906
Transcription machinery [BR:
pmer03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
INE87_02906
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
Sigma70_ECF
HTH_23
Phage_terminase
HTH_28
KORA
HTH_40
Motif
Other DBs
NCBI-ProteinID:
QUT50414
LinkDB
All DBs
Position
3540461..3541030
Genome browser
AA seq
189 aa
AA seq
DB search
MLVEKKILSDHFEEIYVSWFSRMKYFALEYVVSEEDAENIVQDVFTELWERKEILAYDVN
LVALLFTSIKNRCIDLLRHRIVVKEAVNLIQEEYQATLRMKLASLELFDQSLLSEQDIER
IITEVVDSLPEKCREIFIKSKIEGKKQKDIAAELNISLKTVENQMAIAYKKIKSELKDYL
PLLIFLLAN
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgctggttgaaaagaaaatactatccgaccattttgaagaaatatatgtctcttggttt
tcccggatgaaatatttcgctctggagtatgtcgtgtcagaagaagacgcagaaaatatc
gtccaggacgtatttaccgaattgtgggaaagaaaagagatcttggcttatgatgtgaat
ctggttgccctgctttttacttcgatcaaaaaccgttgtatcgaccttttacgtcaccgc
attgttgtaaaggaagctgtcaacctgatacaggaagagtatcaggctactttgcggatg
aaacttgcctccttggaattattcgatcagtctctactctccgagcaggatatcgaacgg
atcattactgaagtggtagactctttgcctgaaaaatgtcgggaaatttttatcaaaagc
aaaatagaggggaaaaaacagaaagacatagctgctgaattgaatatttcccttaaaact
gttgaaaatcagatggctatcgcctataagaaaattaaaagcgaattgaaagactatctc
cctttattaatatttttactcgctaattaa
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