Parabacteroides merdae: INE87_03127
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Entry
INE87_03127 CDS
T07751
Symbol
msbA
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pmer
Parabacteroides merdae
Pathway
pmer02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pmer00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
INE87_03127 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmer02000
]
INE87_03127 (msbA)
Enzymes [BR:
pmer01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
INE87_03127 (msbA)
Transporters [BR:
pmer02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
INE87_03127 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
DEAD
AAA_21
Zeta_toxin
AAA_22
AAA_16
RsgA_GTPase
AAA_24
AAA_25
AAA
NACHT
SbcC_Walker_B
Ploopntkinase3
nSTAND3
DUF87
nSTAND1
APS_kinase
CspB_prodomain
AAA_15
Motif
Other DBs
NCBI-ProteinID:
QUT50628
LinkDB
All DBs
Position
3822516..3824363
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AA seq
615 aa
AA seq
DB search
MKDFLRILRRFVPPYKKFMVWNVIFNVLSAILNLFSFALIIPILNILFKISDETYTYTDW
TFAPFSFEAWKATPELLKNNFFWFVSDMIETKGGSFTLIILGVFLIVSTFLKVGTMYMAF
YTMIPIRTGVVRDIRNQINRKITELPLGFFSEERKGDIIARVSGDVNEIETSIMSSLDML
FKNPILILIYLIGMIAISWQLTLFVFILLPFAGYVMGTVGKKLKRKSFEGQQQWGYLMSQ
IEETLGGLRVIKAFNAEAKIQDRFEKSNETFRRLTNRIYRRQQMAHPMSEFLGTATIAIV
LWYGGTLILSSNSPIDASTFIYYLVIFYSIINPAKDLSKASYAIQKGLASMDRVDKILKA
ESNINDPEDPKPIALTESICYRDVWFKYQHEWVLKGIDLTIPKGHTVALVGQSGSGKSTL
VDLLPRFYDVDKGSITIDGTDVRDATLYDLRSLMGNVNQEAILFNDTFFNNISFGVEGAT
LEQVQEAARIANAHDFIMASEDGYDTNIGDRGGKLSGGQRQRISIARAILKNPPILILDE
ATSALDTESERLVQEALENLMRNRTTIVIAHRLSTIRNADEICVMHEGEIVERGRHEELI
ALDGYYKRLCDMQSF
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgaaggattttctgcgtatactgaggcgttttgtgcctccctataagaaatttatggtg
tggaatgtgatatttaacgtcctgtctgccattttgaacctgttctcttttgcattaatc
atcccgattctgaatatcttgtttaaaatcagtgacgaaacctatacctatacggattgg
acgttcgcccctttctcgttcgaagcctggaaagcgactccggaattgctgaaaaacaac
ttcttttggttcgtgtccgacatgatcgagacgaaaggcggttccttcacgctgatcata
ttgggtgttttcctgatcgtgtctactttcttgaaggtcgggacgatgtatatggctttt
tatacgatgatcccgatccgtacgggtgtcgtccgcgacatccgcaatcagatcaaccgc
aagataacggaactccctctgggctttttctcggaagagcggaagggggatataatcgca
cgcgtttcgggagatgtgaacgagatcgagacttcgatcatgagttcgcttgatatgctc
ttcaaaaacccgatcctgatcctgatctacctgatcgggatgatcgccatcagctggcag
ctgacgctttttgtcttcatcctgctgcctttcgccggatatgtgatgggaacggtcgga
aagaagttgaaacggaaatcgttcgagggacagcaacaatgggggtatctgatgagtcag
atagaggagacgttgggtggcctgcgtgttatcaaggctttcaatgcggaggcgaagata
caggaccgttttgagaaaagcaacgaaacgtttcggcggctgacgaaccgcatttaccgc
cgccagcagatggcgcatcctatgagcgagttcttggggacagccacgatcgcgatcgtg
ctgtggtatggcggtacgctgatcctgagcagtaacagtccgatcgacgcctctactttc
atctactacttggtgattttttacagtataatcaatccggcgaaggatcttagcaaggcc
tcttatgccattcagaaagggcttgcctctatggatcgcgtcgataagatcctgaaggcg
gaaagcaatattaacgatcctgaggatccgaaaccgattgctctgacggaaagtatttgc
taccgggatgtctggttcaagtaccagcatgaatgggtgctgaaaggcattgacctgacg
attccgaaaggacacacggtagcgctggtcggccagtcggggtcgggaaagagcacgttg
gtggatttgctgcctcgtttctatgatgtggacaaggggagcataacgatcgacggaacg
gatgtgcgtgatgcgaccttgtacgatctgcgcagcctgatggggaatgtcaaccaggag
gcgattctttttaacgacacatttttcaataatatctctttcggagtggaaggggctaca
ctcgaacaggtccaagaggcggcccgtatcgccaatgcgcatgattttatcatggcgagc
gaagatggatacgatactaatatcggtgaccgcggcggtaagttgtcgggcggacagcgc
cagcgtatcagtattgcacgtgccattctgaagaacccgccgatcctgatcctcgacgag
gcgacttcggcgctcgacaccgagtcggaacgcttggtgcaggaggctttggagaacctg
atgcgtaaccgtacgacgatcgtgattgcacaccggctctcgacgattcgtaatgcggac
gagatttgcgtgatgcatgaaggggagattgtggaacgcggacggcacgaggagctgatt
gcattggatggatattataaaagattgtgcgatatgcaaagtttttga
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