Parabacteroides merdae: INE87_03161
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Entry
INE87_03161 CDS
T07751
Name
(GenBank) Bacteriodales T6SS TssH (ClpV) protein
KO
K03544
ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
pmer
Parabacteroides merdae
Brite
KEGG Orthology (KO) [BR:
pmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pmer03110
]
INE87_03161
Chaperones and folding catalysts [BR:
pmer03110
]
Heat shock proteins
HSP100
INE87_03161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA
zf-C4_ClpX
ClpB_D2-small
AAA_5
AAA_22
RuvB_N
Mg_chelatase
MCM
Sigma54_activat
AAA_7
AAA_14
IstB_IS21
ResIII
TsaE
NACHT
TIP49
AAA_16
AAA_24
DEAD
AAA_28
ABC_tran
PhoH
PIF1
AAA_18
nSTAND3
AAA_3
TrwB_AAD_bind
AAA_33
Sigma54_activ_2
Motif
Other DBs
NCBI-ProteinID:
QUT50662
LinkDB
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Position
3863563..3864792
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AA seq
409 aa
AA seq
DB search
MAKTGDSCTFCGRGSRDVNMLINGISGAICDECAQQAYEIVKEQMPGKGSSFGLNQKDLP
KPEDIKTFLDQYVIGQDDAKRYLSVAVYNHYKRLIQKVTSDDVEIEKSNIIMVGATGTGK
TLLARTIAKLLHVPFAIVDATVLTEAGYVGEDIESILTRLLQAADYDVEAAQRGIVFIDE
IDKIARKSDNPSITRDVSGEGVQQGLLKLLEGSIVNVPPQGGRKHPEQKMIAVDTKNILF
VCGGAFDGIEKKIAQRLNTRVVGYAANENTAQVDRNNLLKYITPTDLKSFGLIPEIIGRL
PILTYLNPLDRSTLRNILTEPKNSIIKQYIKLFAMDDIELTFDEDVFEFIVDKALEFKLG
ARGLRSIVEAVMMDAMYSMPSANEKTLHVTLEYAKEKFEKSDVNRLQMT
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaacaggcgatagctgtacgttttgcggacgcggtagccgggacgttaatatg
ttgattaacgggatttccggtgctatttgcgatgaatgtgcacagcaagcgtacgaaata
gtaaaagaacaaatgcctggcaaggggagttcttttggattaaaccagaaagatctgcct
aagcctgaggatattaagacttttctggaccaatatgtgataggtcaggacgacgctaaa
cgttatctgtcggttgctgtgtataaccattacaaacgtttgatccagaaagtaacatcg
gatgatgttgagatcgagaaatcgaatattattatggtgggtgctacggggacaggtaaa
acgctacttgcccgtacgatcgccaaattgctccatgtcccgtttgccattgtagatgcg
acggtcttgacagaagccggttatgtaggggaggatatagaaagcattttgacccgtctg
ttgcaggctgccgattatgatgtcgaagcggcacagcgtggtatcgtatttatcgatgaa
atagataagatcgcccgtaagagcgataatccttccattacccgtgatgtaagcggtgaa
ggtgtgcagcagggcttgctgaagctcttggaaggttccatcgtgaacgtccccccgcag
ggtgggcgcaagcatccggagcagaaaatgattgccgtggatacgaaaaatatcctgttt
gtatgtggtggcgctttcgacggaatagagaagaaaatcgcccagcgtttgaatacacgt
gtagtaggatacgccgcaaacgaaaacacggcgcaggtggatcgcaacaatctgctgaaa
tacattacaccaaccgacttgaaatcgtttggcctgattccggaaatcatcggacgtctg
cctatcttgacctatttgaacccgttggataggagtacgcttcgtaatatcttgacggaa
ccgaagaactcgatcatcaagcaatatatcaaattgtttgcgatggatgatattgaactg
acatttgacgaagacgtgttcgaatttatagtcgataaggcacttgagtttaagttggga
gcacgtggcttacgttccattgtggaggctgtgatgatggatgccatgtacagtatgccg
tctgcaaatgaaaagacactccatgtcacgttggagtatgcgaaggaaaagtttgaaaaa
tcggacgtaaaccgtctgcagatgacctga
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