Parabacteroides merdae: INE87_03200
Help
Entry
INE87_03200 CDS
T07751
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pmer
Parabacteroides merdae
Pathway
pmer03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmer00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
INE87_03200 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmer03021
]
INE87_03200 (rpoA)
03400 DNA repair and recombination proteins [BR:
pmer03400
]
INE87_03200 (rpoA)
Enzymes [BR:
pmer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
INE87_03200 (rpoA)
Transcription machinery [BR:
pmer03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
INE87_03200 (rpoA)
DNA repair and recombination proteins [BR:
pmer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
INE87_03200 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
CRM1_C
Motif
Other DBs
NCBI-ProteinID:
QUT50701
LinkDB
All DBs
Position
3892477..3893469
Genome browser
AA seq
330 aa
AA seq
DB search
MAILAFQKPDKVLMLEADNFFGKFEFRPLEPGYGITIGNALRRILLSSLEGFAITSIKIE
GVDHEFGTIPGVIEDVTNIILNLKQVRFKHIVDDIENEKVSITVSGSEVFKAGDIGKQLT
GFEVLNPELVICRLDPNAGFQIELTINKGRGYVPADENRDPNADMHVIAIDSIYTPIRNV
KYSIENFRVEQKTDYEKLVLEIATDGSIHPKEALKEAAKILIHHFMLFSDEKIAIETVDT
DGNEEFDEEVLHMRQLLKSKLSDMDLSVRALNCLKAADVETLGELVKFNKNDLLKFRNFG
KKSLTELDELLESLNLSFGMDITKYKLDKE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcgatattagcatttcaaaaacccgataaagtattaatgttggaagcggacaatttc
ttcggaaagtttgaatttcgtccgttggaacccggctatggtattactataggtaatgct
ctgcgccgtattctcctgtcgtcacttgaaggttttgctattacatccattaaaatcgaa
ggggttgaccatgaatttggtacaatccccggtgttatcgaggatgtgacaaacattatc
ttgaatctgaaacaagtacggttcaagcatattgtagacgacatagagaatgaaaaagta
agtattactgtttcgggttcggaagtgttcaaagccggtgatattggtaaacagctgacc
ggattcgaggtattgaatcctgagttggttatttgtcgtttggatccgaacgcaggtttc
cagatcgagctgacgattaacaaaggtcgcggatatgttcccgctgatgaaaacagagat
ccgaatgcagacatgcacgtgattgcaatcgactctatttacacacctattcgcaacgtt
aagtattcgatcgagaacttccgtgttgagcaaaagacggactacgaaaagttggttctt
gaaatagccactgatggttctattcatccgaaggaagcgttaaaagaagcagctaagatt
ctgattcaccatttcatgttgttctcagatgaaaagattgctatcgagacagttgacact
gacggtaatgaggaattcgatgaagaagtgcttcacatgcgtcagttgctgaagagcaag
ctctcggatatggatctttccgttcgcgcattgaattgcttgaaggccgcagatgttgaa
acattaggtgaactggttaaattcaacaagaatgacctgttgaaattccgtaacttcggt
aagaagtcacttacagaacttgatgaactgcttgagagtctgaacctttcattcggtatg
gatatcactaaatataaattagataaagagtaa
DBGET
integrated database retrieval system
