Parabacteroides merdae: INE87_03581
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Entry
INE87_03581 CDS
T07751
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pmer
Parabacteroides merdae
Pathway
pmer00300
Lysine biosynthesis
pmer00470
D-Amino acid metabolism
pmer01100
Metabolic pathways
pmer01110
Biosynthesis of secondary metabolites
pmer01120
Microbial metabolism in diverse environments
pmer01230
Biosynthesis of amino acids
Module
pmer_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
pmer_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pmer00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
INE87_03581 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
INE87_03581 (lysA)
Enzymes [BR:
pmer01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
INE87_03581 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QUT51075
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All DBs
Position
complement(4312369..4313529)
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AA seq
386 aa
AA seq
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MILKGTFPTEKFKSLATPFYFYDITLLKETLNTVKTEAGKYGYHVHYAVKANANPRILSI
IAEYGLGADCVSGGEIQAALDAGFPARKIVYAGVGKADWEINLGLDNDIFCFNVESAAEL
EILEELAAAKNKVASIALRINPEVDAHTHAKITTGMKENKFGINLSQLGQVLDLVCRLEH
IKLIGIHCHIGSQITDMAAFRGLVIRVNEIQEELEARGIKVENLNFGGGLGIDYYHPNHL
PIPAFDNYFAVFNKLLQLRPGQQVHFEPGRSIVAQCGSLISKVLYVKVGETKKFCILDAG
FTELIRPAMYDAYHRMENITSDEEVEVYDVVGPICESSDVFGKDVELNRAHRGDLIALRS
AGAYGEVMASQYNCRKLPTAHYSDTM
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgatattaaaaggtacatttcctacagaaaagttcaaatcactggcaactccgttctat
ttttacgatataacgttgttgaaagaaacacttaatacggtaaaaacggaagccggaaag
tatggctatcatgtccactatgcagtcaaggcaaacgccaatccccgcatcttgtctatt
attgcagaatatggcttgggagccgactgtgtgagtggcggtgaaatacaggcggcactc
gatgcaggtttccctgccagaaaaatcgtttatgccggtgtcggcaaagcagactgggag
atcaatttaggactggacaacgatattttctgcttcaacgtagaatcggctgccgaactg
gaaatcttggaagaattggctgccgccaaaaacaaagtggcctcgatcgcccttcgtatc
aacccggaagtagacgctcatacacatgccaagatcacgactggtatgaaggaaaacaaa
ttcggtatcaatttgagccagctcggacaggtgttagatttagtctgccgtctggaacat
atcaaattgatcggcatccattgccatatcggctcacaaattacagatatggctgctttc
cgtggcctggtaatccgtgtcaatgaaattcaggaagagctggaggcgcgtggaataaaa
gttgagaatctgaacttcggtggcggtctcggtatcgattattatcacccgaatcatttg
cctatcccggcattcgacaactattttgccgtgttcaacaaactattgcagcttcgtccg
ggacagcaggttcatttcgagccgggacgttccatcgtcgcacaatgcggttcgctgatt
tctaaagtactatatgtaaaagtcggcgagacaaagaaattctgtattttagatgccggc
ttcaccgaactgatccgcccggccatgtacgatgcataccaccgcatggagaatatcacc
agcgacgaagaagttgaagtttatgacgttgtcggtccgatctgtgaatcgtccgacgtg
ttcggtaaagatgtcgaactgaaccgtgcccaccgtggcgacctgatcgccctccgctct
gcaggtgcttacggcgaggtaatggcctcacaatataactgtcggaaattaccgacagct
cattactcggatacgatgtaa
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