Parabacteroides merdae: INE87_04006
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Entry
INE87_04006 CDS
T07751
Symbol
hup_5
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
pmer
Parabacteroides merdae
Brite
KEGG Orthology (KO) [BR:
pmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmer03032
]
INE87_04006 (hup_5)
03036 Chromosome and associated proteins [BR:
pmer03036
]
INE87_04006 (hup_5)
03400 DNA repair and recombination proteins [BR:
pmer03400
]
INE87_04006 (hup_5)
DNA replication proteins [BR:
pmer03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
INE87_04006 (hup_5)
Chromosome and associated proteins [BR:
pmer03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
INE87_04006 (hup_5)
DNA repair and recombination proteins [BR:
pmer03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
INE87_04006 (hup_5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QUT51496
LinkDB
All DBs
Position
PmerCL06T03:64209..64493
Genome browser
AA seq
94 aa
AA seq
DB search
MTKSEIVKEISARTGIDGKAVLAVLEGFMNEVKTSLGKEENVYLRGFGSFIVKKRAQKTA
RNISKNTTMIIPAHNIPAFKPSDEFLKMVKQQNA
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgactaaatcggaaatcgtaaaggaaatatctgccagaaccggcatcgacggcaaagcg
gtgcttgctgttttggaaggattcatgaacgaggtaaagacttcgttgggtaaggaggaa
aatgtctatcttcgtggattcggtagtttcatagtgaagaagagagcgcaaaagacagct
cggaatatctctaagaatactactatgattattccggctcataacataccggcatttaaa
ccgtctgacgaatttttgaaaatggtaaaacaacagaacgcataa
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