Paraglaciecola mesophila: FX988_00113
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Entry
FX988_00113 CDS
T06389
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pmes
Paraglaciecola mesophila
Brite
KEGG Orthology (KO) [BR:
pmes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmes03009
]
FX988_00113
Enzymes [BR:
pmes01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FX988_00113
Ribosome biogenesis [BR:
pmes03009
]
Prokaryotic type
ribosomal protein modification factors
FX988_00113
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
HTH_TGH
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QHJ09905
UniProt:
A0A857JCZ8
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Position
complement(131339..132760)
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AA seq
473 aa
AA seq
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MTVETFNPKQTTTLETPVKTIEADKPSSLSTGSRIGFVSLGCPKNLVDSERILTQLRTEG
YDVVNTYNDADLVIVNTCGFIDTAVQESLDTIGEALTENGKVIVTGCLGIKEDEIREVHP
NVLAITGPHAYEEVVNQVHEHLPQPSHNPYLNLVPDIGVKLTPRHYAYLKISEGCNHRCT
FCIIPSMRGDLVSRPIGEILDEAQRLKNAGVKELLVISQDTSAYGVDVKNKMGFWNGMPV
KTGMTELCEKLGEMGMWVRLHYVYPYPSVDKVMPLMASGKVLPYLDIPFQHASPRILKLM
KRPAAAERTMERIRKWRELCPELVIRSTFIVGFPGETEEDFQMLLDFLDEAQLERVGCFK
YSDVEGAKANDLPDPVSEEVKQERFERFMQKQQQISSAKLQRRIGTTIQVLIDEVDEEGA
IGRSFADAPEIDGLVYLNGDVELKPGDLITATVEHADEYDLWASRTVNSDLSA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgactgttgaaacctttaatcccaagcaaacgacgacgttagaaacaccggtaaaaacc
attgaagcggataagcccagttccttatcgacaggatcgagaattggctttgtaagctta
ggctgcccgaaaaatctggtcgactcagagcgtattttgacccaactgcgcaccgaaggc
tacgacgtggtgaacacctataacgatgcagatctcgttattgtgaatacctgtggcttt
atcgataccgccgtgcaggagtcactcgacaccataggcgaagcgcttactgaaaatggc
aaagtaattgtaactggctgtttgggtatcaaagaagacgaaattcgcgaagtacacccg
aatgtgcttgccattaccggccctcacgcttatgaagaggtggtcaaccaagtgcatgag
catttgccacagccaagccacaacccgtatttaaatttagtgccggacattggcgtcaag
cttaccccgcgccattatgcctatttaaaaatatctgaaggctgtaaccacaggtgtacc
ttctgcattattccgtctatgcgcggcgatttagtcagccgtcctatcggcgagatccta
gatgaagcccagcgcttaaaaaacgctggcgtaaaagagttattggttatttcacaagac
accagcgcctacggcgtagacgtgaaaaacaaaatgggcttttggaatggcatgccggta
aaaaccggcatgacagagctgtgtgaaaaactcggcgaaatgggcatgtgggtacgtttg
cattacgtttacccctatccatctgttgataaggtcatgccgcttatggcttcaggtaaa
gtattgccttaccttgatattccttttcagcatgctagcccacgtattctaaaattgatg
aaacgcccggccgctgctgaacgcaccatggaacgcatcagaaaatggcgcgagctatgc
cctgagctagttatacgctctacgtttattgtgggtttccctggtgaaaccgaagaagac
tttcaaatgctgctcgacttcttagacgaagcccaacttgagcgcgtgggctgctttaaa
tactcagatgttgaaggtgctaaagcgaatgacttgcctgacccagtcagcgaagaagtt
aaacaagagcgcttcgaacgctttatgcaaaaacaacagcaaattagcagcgctaaattg
cagcgccgaatcggtaccaccattcaggtacttatcgatgaagtcgacgaagaaggcgct
attggtcgcagttttgccgatgcccctgaaatcgacggtttagtttatttaaatggtgat
gttgagcttaaacctggtgacttgattaccgccacagttgaacatgctgacgaatacgac
ctatgggcatctcgtacggtgaatagcgatttgagtgcgtaa
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