Paraglaciecola mesophila: FX988_00809
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Entry
FX988_00809 CDS
T06389
Name
(GenBank) Serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
pmes
Paraglaciecola mesophila
Pathway
pmes00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmes00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FX988_00809
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmes01007
]
FX988_00809
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmes03016
]
FX988_00809
Enzymes [BR:
pmes01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
FX988_00809
Amino acid related enzymes [BR:
pmes01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
FX988_00809
Transfer RNA biogenesis [BR:
pmes03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
FX988_00809
Prokaryotic type
FX988_00809
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
ZapB
YL1_C
Motif
Other DBs
NCBI-ProteinID:
QHJ10590
UniProt:
A0A857JHD0
LinkDB
All DBs
Position
complement(956272..957570)
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AA seq
432 aa
AA seq
DB search
MLDAKYLRNDINIAAQKLNKRGYALDVAQFTALEEKRKALQMRTQELQNERNVRSKSIGK
AKASGQDIAPLLAEVGQLGDELDAAKAQLTVLLDEIQALVLNIPNLPDDSVPEGKDEEEN
VEVSRWGTPREFDFEVKDHVDLGAGVANGLDFETATKLTGSRFVVMRGQIARLNRAIAQF
MLDLHTEQHGYQEMYVPYLVNEESMLGTGQFPKFVGDAFHTKPATEEGQGLSLIPTSEVP
LTNIARDCIFAANELPIKMTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQLVEADKS
FEALEELTGHAEKVLQLLELPYRKMLLCTGDMGFGACKTFDLEVWLPAQNTYREISSCSN
MFDFQARRMQARYRDPKTNKTELLHTLNGSGLAVGRTLVAILENYQQADGSITIPTALQP
YMNGVTVIGEVK
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgttagatgctaagtatttacgtaacgatataaacattgcggcgcaaaaactcaacaag
cgtggctatgcgcttgatgtcgcacagttcactgctctagaagaaaagcgcaaagcatta
caaatgcgcactcaagaattgcaaaacgaacgtaatgtgcgctctaagtctatcggtaaa
gcgaaagcgtcaggtcaagatatcgcccctttactggcagaagtcggtcaactaggtgat
gagctagatgccgccaaagcacaactcacggtattgctagatgagatacaagcattagta
cttaacattcctaacttacctgacgactccgttcctgaggggaaagacgaagaggaaaac
gttgaagtgtcgcgctgggggacacctcgagaatttgattttgaagtcaaagatcatgtt
gacctcggagctggggtagccaacggtttagattttgaaacggccactaaattaaccggc
tctcgttttgtagtgatgcgtggccaaatagcgcgcttaaaccgcgcgattgcccagttt
atgcttgatttacataccgaacagcatggctatcaagaaatgtatgtgccgtacttggtg
aatgaagaaagcatgttagggacgggacagtttcctaaattcgttggggatgcattccat
accaaaccggcgacagaagaaggccagggtttgtctttaattccaacctctgaggtacca
ttaactaatattgcccgggactgcattttcgccgcaaatgaattgcccattaaaatgacg
gcgcacactccatgttttagaagtgaagcaggttcgtacggccgagatacgcgtggatta
attcgtcaacatcagtttgataaagttgaaatggtgcaattggttgaagccgataagtca
tttgaggcattagaggaattaaccgggcacgctgaaaaagtattgcagttgcttgagtta
ccttaccgtaagatgttgctttgtactggcgatatgggctttggggcatgtaaaacattt
gatttagaagtgtggttgccagcacaaaatacttatcgtgagatatcttcatgttctaac
atgtttgatttccaagcgcgtcgtatgcaagcgcgttatcgcgacccgaagaccaacaaa
acagaattgttacatacactgaatggttcagggttggctgttggacgcacgcttgtggcg
attctagagaactatcaacaagctgacggcagcattactattccgacagcgcttcagcct
tatatgaatggtgtcactgtgattggtgaagttaaatag
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