KEGG   Paraglaciecola mesophila: FX988_00960
Entry
FX988_00960       CDS       T06389                                 
Name
(GenBank) Signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
pmes  Paraglaciecola mesophila
Pathway
pmes02024  Quorum sensing
pmes03060  Protein export
pmes03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pmes00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    FX988_00960
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    FX988_00960
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    FX988_00960
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pmes02044]
    FX988_00960
Enzymes [BR:pmes01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     FX988_00960
Secretion system [BR:pmes02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   FX988_00960
  Eukaryotic Sec-SRP protein
   FX988_00960
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N cobW CbiA AAA_22 Zeta_toxin KTI12 AAA_30 AAA_33 nSTAND3 AAA_31 AAA_16 T2SSE YqeC APS_kinase AAA_14 nSTAND_NTPase5 NAT10_TcmA_helicase ArsA_ATPase TsaE VirC1 ATP_bind_1 KAP_NTPase Thymidylate_kin
Other DBs
NCBI-ProteinID: QHJ10739
UniProt: A0A857JFE0
LinkDB
Position
complement(1121953..1123329)
AA seq 458 aa
MFENLTERLGKTLKDISGRGRLTDDNIKDTLREVRMALLEADVALPVVKSFIEQVKVRAV
GTEVSKSLNPGQVFIKIVQAELESVMGQANEGLDLAAQPPAVVLMAGLQGAGKTTSVGKL
ARYLTEREKKKVLVVSADIYRPAAIKQLETLAIEIGVECFPSTIEQKPIDIVNDAVEYAK
KKFFDVLLVDTAGRLHIDAEMMGEIKDLHQAIKPIETLFVVDAMTGQDAANTAKAFNEAL
PLTGVILTKTDGDARGGAALSVRHITGKPIKFLGMGEKVDALEPFHPERVASRILGMGDV
LSLIEEVERKVDKNKAQRLAKKVQKGKGFDLQDFKEQLEQMRNMGGMMSMMDKLPGMGNM
TAQVKDKANDKSFNQMEAIINSMTPLERAKPDTIKGSRKRRIAMGSGTQIQDVNRLLKQF
TQMQKMMKKMSGGGMKKMMRNMKGMMPPGGPGGMFPPR
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgtttgaaaatttaacagaacgcttaggcaaaacgctcaaagacattagcggccgcggc
cgattaacagatgacaacattaaagacacgttgcgtgaagtgcgcatggcgctgcttgaa
gctgatgtcgccttgcctgtagtaaagagttttattgagcaggtgaaagtgcgtgcggta
ggcactgaggtttcgaaaagcttaaatccaggccaagtgtttattaaaatcgtgcaagcg
gaattggaatctgtcatggggcaggccaatgaaggattagatttagctgcccagcctccc
gctgttgtgctaatggcaggtttacaaggtgcaggtaaaaccaccagtgtcggtaaatta
gcgcgctacttgactgaacgcgaaaagaaaaaagtccttgtggtcagtgctgatatctat
cgtcctgcagcgattaagcaacttgaaacccttgcaatagaaatcggagttgaatgtttc
ccgtcgacgattgaacaaaaaccaattgatatcgttaacgatgcggttgagtacgcaaag
aaaaaattctttgatgtattgcttgtcgataccgctggccgtttacacattgatgctgag
atgatgggggaaattaaagaccttcatcaagctataaagccgatagaaacgctgtttgta
gtcgatgctatgacaggacaagatgcggccaatacagcaaaagcatttaacgaagcattg
ccattaaccggggttattttaactaaaaccgacggtgatgctcgtggtggtgcagctctg
tctgttcgtcatattacgggtaagccgattaaattcctagggatgggggagaaagttgac
gctcttgagcctttccatccagagcgagtggcttcgcgcatccttggtatgggagatgta
cttagtttaatcgaggaagtcgaacgtaaagttgataagaacaaagcacaacgccttgcc
aagaaagtacaaaaaggcaaaggttttgatttacaggacttcaaagagcagttagaacaa
atgcgcaatatgggtggtatgatgtcgatgatggacaaactgcccggcatgggtaacatg
actgctcaggtaaaagacaaagccaatgacaagtcgtttaaccaaatggaagcaattatc
aactctatgacgccacttgagcgtgcaaaacctgacacgataaaaggctcgcgtaagcga
agaattgcaatgggctcgggtacgcaaattcaagacgtaaatcgcttattaaagcagttt
acccaaatgcaaaaaatgatgaaaaaaatgtctggcggtggcatgaaaaaaatgatgcgt
aacatgaagggaatgatgcccccaggcggaccgggaggcatgtttcctccgcgctaa

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