Paraglaciecola mesophila: FX988_00988
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Entry
FX988_00988 CDS
T06389
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pmes
Paraglaciecola mesophila
Brite
KEGG Orthology (KO) [BR:
pmes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmes03400
]
FX988_00988
DNA repair and recombination proteins [BR:
pmes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FX988_00988
Archaeal homologous recombinant proteins
FX988_00988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF349
HEAT_2
KMP11
Motif
Other DBs
NCBI-ProteinID:
QHJ10767
UniProt:
A0A857JII7
LinkDB
All DBs
Position
complement(1157459..1160257)
Genome browser
AA seq
932 aa
AA seq
DB search
MIFKKLFRPKHQDPKPAVRIAAIDSLSGEEPEQKSILHELAFNDEDVNVSLAALSKLNSF
VLWYKMSEIAKSERVLKRAQQMVESTLFGDDESMLSQQQKREFAYECKNNKLLERLIKQP
WVQQEPKLVLHILSVLNKPQLALPILLASQDNDLQQALLVYADSPASLQKIIKKATGEQI
KSLAKDKLEQIEFAKAQPVAVEKSTRLVLSRLLALREQRDYAKLLDTRSKLNEEYAQYSA
QFDCLSADKRDEFITKFDELSSKLDILDAELAPLYQAEQKKRHIADAVQHATADTQAMQV
WLSDMLAGDISSITLAQTEQAQTEIQNRTGRIENLMRDADSVGMAAQKAEFNSLLVTLQK
RQHTFNHLPAFQDSLKQADALITEFAKMAVPEQAIDVQHAQNMLKEKQGQWRKLRESYQD
SWPKALDQQFGALQKTWQSAIKSLTVGISKEVSRIRSKAKAIDVLIEQGKYKAAIGLFAK
VSKWFDALPEQEKKRNERTYEQISSKVEELKSLQAYIAMPRKPALIKEAQTLVEANLSVS
LRAERVKELRRRWNSLGVLNTPEDDALNGDFDTLIEQAFAPCRQHFEKQQAQRESNLVQK
QALIVEITDLAEQNLDESELSKVVQQLQQKWQKIGDVDFTVKTEINDAYRKVLAPFKKKI
EAYFNENAAQKQALITQAQSLSSVEDVAQAIDQAKVLQDKWKQVGQVQRKSENLLWNQFR
EANDVVFAKRKAHNQQQKQANDAHVSAVNGLMANMQQSINAAQSISELDETRAAEAELEA
QLSALPKGLSSGLYRRLTGLSEERQAKRASLELQAKTQSFSKVFDVLKRWETPALPEEIE
SLPSQWQQSFKALVQHDVPRLNLTLMLEIVSDIPSPQTDDSLRKEIQLQLMADKLQQGVE
YDKTSLLKRWIQHGPVAQQEQVLLTRAQRCFA
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgatatttaaaaaactgtttcgccctaagcaccaagatcctaaaccggcggtgcgtatt
gctgcgattgattctttgtctggtgaggagccagaacaaaagtcgattttacatgaactg
gcttttaatgacgaagatgtaaacgttagtttagctgccttgagcaaactaaacagtttc
gtactttggtataaaatgtctgaaattgccaaaagcgaacgcgtcttaaagcgtgctcag
caaatggttgaaagtaccttatttggcgatgatgaaagtatgttgagccaacaacaaaag
cgtgagtttgcatatgaatgcaaaaacaataagttattagagcgcttgattaaacagcct
tgggtgcaacaagagccgaaattagtgctgcatattttgtctgtgttgaacaagccgcaa
ttagcattacctatattattagcgagccaagataatgatttgcaacaggctctgctggta
tacgctgatagtccagcaagcttgcaaaaaatcattaaaaaggccactggtgagcaaatt
aagtctttagcaaaagacaaacttgagcaaatagaatttgccaaagcacagcctgttgcc
gtagaaaagagcactcgccttgtgttatcgcgtttgttggcccttagagaacagcgcgat
tatgctaaattactggacacacgcagtaaattaaacgaagaatatgcccaatattcagcg
caatttgattgtctttcagccgataaacgcgacgagtttataacaaaatttgatgagctt
agtagcaagttagacattttagacgcagagctggcaccactataccaagcagagcaaaag
aaacgtcacatagcagacgctgtacaacatgctacagccgatacccaagccatgcaggtt
tggttgtctgatatgcttgctggggatatttctagtattaccctggcacaaacagagcaa
gcgcaaacagagattcaaaaccgcactggccgaattgaaaacttaatgcgggacgctgat
tcagtgggtatggcagcacaaaaggcagaatttaactcgctgcttgttacattgcaaaag
cgccaacataccttcaatcacctacccgcatttcaagactcgctgaaacaagccgacgcc
ttaatcacggaatttgcaaaaatggcagtccctgagcaagcgattgacgtgcaacacgcg
caaaatatgctcaaagaaaagcaaggtcaatggcgtaaattaagggagtcgtatcaggac
agctggcccaaagcactagatcaacaatttggagctttgcagaaaacgtggcaaagcgct
attaagtctctgactgttggcatctcaaaagaggtcagtcgtattcgcagcaaagccaaa
gccatcgatgtacttattgagcaaggtaagtacaaagcggcgatagggttgtttgctaag
gtgagtaaatggtttgatgccttgcccgagcaagagaaaaagcgtaacgaacgtacgtat
gagcagattagtagcaaagttgaagagttgaagtcgttgcaagcctatattgctatgcca
cgaaaacccgccttaattaaagaggcgcaaacgttagtagaagcaaacctgtcagtgtca
cttcgcgcagaacgcgtcaaagagttacgccgacgttggaatagcttaggggtgttaaac
acccctgaggatgatgcattaaatggtgactttgacacattgatcgaacaagcgtttgca
ccttgtcggcagcatttcgaaaagcaacaagctcaacgagagagcaacctagtgcaaaaa
caagcgttaatcgttgagattactgacttagcagagcaaaatttagacgaaagtgagctg
agtaaagtggttcaacagctacaacaaaaatggcaaaaaattggcgatgtagatttcact
gttaaaaccgaaattaacgatgcataccgcaaagtattggccccttttaagaagaaaatt
gaggcgtatttcaatgaaaacgctgcccaaaagcaggcattgattactcaagcgcaatcg
ttaagctcagtagaggatgtcgcgcaagctattgaccaggccaaggtgttacaggataaa
tggaagcaagtagggcaggtacaacgtaagtctgaaaacctgctgtggaatcagtttcgt
gaagctaacgatgttgtgtttgcgaaacgcaaagcacacaatcaacagcagaagcaagcc
aatgatgcccatgtttctgccgttaatgggttaatggcaaatatgcagcagtcaatcaat
gctgcacagagcatcagtgaactggatgaaacacgcgctgctgaagctgagttagaagca
caattatcagcgttacctaaaggactaagctctggcttgtatcgacgcttaactggtttg
agtgaggaacgtcaagcaaaacgcgctagcttagagttacaagcgaagacacaaagtttt
agcaaggtgtttgacgtgttgaaacgctgggaaacgcccgctttacctgaagaaatagaa
agcttacctagccaatggcagcaatcgtttaaggcgctggtgcagcatgacgtgccgcgt
cttaatttaacattgatgctagagatcgtaagcgatattccatctcctcagacagacgac
tcattacgcaaagaaatacagttgcaattgatggctgataaactgcaacaaggcgttgag
tatgataagacgtccttgttaaaacgttggatacaacatggtcctgttgctcagcaagag
caggtattattaacccgtgcccaacgatgctttgcgtaa
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