Paraglaciecola mesophila: FX988_01077
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Entry
FX988_01077 CDS
T06389
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase DacA
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
pmes
Paraglaciecola mesophila
Pathway
pmes00550
Peptidoglycan biosynthesis
pmes01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmes00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FX988_01077
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmes01002
]
FX988_01077
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pmes01011
]
FX988_01077
Enzymes [BR:
pmes01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
FX988_01077
Peptidases and inhibitors [BR:
pmes01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
FX988_01077
Peptidoglycan biosynthesis and degradation proteins [BR:
pmes01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
FX988_01077
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
CytoC_RC
Motif
Other DBs
NCBI-ProteinID:
QHJ10855
UniProt:
A0A857JFS3
LinkDB
All DBs
Position
1252311..1253483
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AA seq
390 aa
AA seq
DB search
MRNTKTLLLAIFSCFSLSFFSHAASAAVIIPDAPTVSAKGFILVDYQTGKVIAEQNADIQ
IPPASLTKMMTSYVIGKEIANGNIKDTDMVTISENAWAKNFPDSSKMFIEVGTQISVADL
NRGIIVQSGNDACVAMAEHIAGSEDAFASMMNLHAEKLGMTSTHFVNSHGLQDADHYTTP
RDMATLARALITDVPNEYKVYSEKEFTYNNIKQYNRNGLLWDKSLNVDGIKTGHTSDAGY
SLVSSATQGDMRLIAVVMGADSERARKVENKKLLKYGFRFYETITPYHAGESFVSHRIFM
GDKETVDLGISQDTPITIPRGQSKNLEANFELDKKLEAPLAKGEVVGKLFLQLDGEDVAE
YPLVTLQEVNEGGMIDRLVDFVKLQLGFDS
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaacaccaagacactcttattagccatatttagctgcttctctctttcctttttc
tctcatgcggcgagtgcagcggttatcatacctgacgcacccaccgtttcagctaagggc
tttattttagttgattatcaaactggcaaagtgattgccgaacaaaacgctgatattcaa
attcctcccgctagtttaacgaagatgatgaccagctatgtgattggtaaggaaatcgcc
aacggcaacattaaagacaccgacatggtgacaatttctgaaaatgcatgggccaaaaat
tttcctgattcatcgaaaatgtttattgaagtgggtacacagatttccgtagccgattta
aatcgtggcattattgttcaatcaggtaatgacgcttgtgttgctatggcagagcatatt
gcaggcagtgaagatgccttcgccagtatgatgaacttgcatgctgaaaaactaggcatg
acatccactcactttgtaaacagccatggtttgcaagacgctgaccattacacaacccca
cgagacatggcaaccctagcacgtgcactcattactgacgtacctaacgaatataaggta
tacagcgagaaagagtttacttacaacaacataaagcaatacaaccgtaatggtttgtta
tgggataaaagtctgaacgtggatggaattaaaacaggccatacatcagatgcgggctac
agcttggtctcttctgctacccaaggagacatgcgtttaatcgctgtggtgatgggtgct
gacagcgagcgtgcgcgtaaagttgaaaataaaaagctacttaaatatggttttagattc
tatgaaaccattaccccttatcatgcgggtgagagcttcgtgtcgcaccgtatatttatg
ggtgacaaagagaccgttgatcttggtatttctcaagatacccccattaccatccctcgt
ggacagagcaaaaatttagaagctaatttcgaactggataaaaagctagaagcgccgttg
gcgaaaggcgaagtggttggaaaattatttttgcaattagacggtgaagacgtcgccgaa
tatcctttggttacattacaagaagtcaacgaaggtggcatgattgatcgcctagtagat
ttcgttaaactacaacttggcttcgatagctaa
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