Paraglaciecola mesophila: FX988_01729
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Entry
FX988_01729 CDS
T06389
Name
(GenBank) Long-chain-fatty-acid--CoA ligase FadD15
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pmes
Paraglaciecola mesophila
Pathway
pmes00061
Fatty acid biosynthesis
pmes00071
Fatty acid degradation
pmes01100
Metabolic pathways
pmes01212
Fatty acid metabolism
pmes02024
Quorum sensing
pmes04146
Peroxisome
Module
pmes_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pmes00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FX988_01729
00071 Fatty acid degradation
FX988_01729
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FX988_01729
09145 Cellular community - prokaryotes
02024 Quorum sensing
FX988_01729
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pmes01004
]
FX988_01729
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmes04147
]
FX988_01729
Enzymes [BR:
pmes01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FX988_01729
Lipid biosynthesis proteins [BR:
pmes01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FX988_01729
Exosome [BR:
pmes04147
]
Exosomal proteins
Exosomal proteins of breast milk
FX988_01729
Exosomal proteins of breast cancer cells
FX988_01729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QHJ11495
UniProt:
A0A857JHL3
LinkDB
All DBs
Position
complement(2006167..2007807)
Genome browser
AA seq
546 aa
AA seq
DB search
MSLQTPLEMMYHWEDSTPQKVYLKQPINGAVISYTWAQTADKVRRVAAGLIALNLPAGSH
IALLSKNCAEWFITDLAIMLAGHVSVPIYSTAGEKTIQYVLNHASCPVIFVGKLDDTAEQ
VAAIPEGVTKLAFPYPGIEADQDWDSLMANEPYMERPVPELDSTMTIIYTSGSTGNPKGV
VHTYNSISWAASNSKNELNVGADDRILSYLPLAHITERVLVEMASFYANTQIGFIESLDT
FNRDICHLRPTLFISVPRLWTRFQMGVLANMPQKKLDFLLKIPFIGNIVAGKIRTKLGLD
KARMCASGSAPISPATLKWFLNIGVKISEGWGMTENSAYGTCCVPFREDKIGSIGRAYEG
VDIRIGDEGEIQVKGPCNMQEYYLEPDKTAETFTDDGYLRTGDKGEIDSDGYVKITGRLK
EIFKTAKGKYIAPVPIEALIMGNSSVEQVCVTGSQLKQPIALIVLSEDAAKQDEDKIEKS
LLATLESVNSGLESHAVLDRFVIMKDDWTVDNGLLTPTLKIKRHLLEEKYDALINDTQKG
KLIYQS
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttacaaacgcccttagaaatgatgtaccactgggaagattcaacacctcagaag
gtatacttaaagcaaccgattaatggtgcggtgattagttatacttgggcacaaacggca
gacaaagtgcgccgcgttgcagcagggttaatagcacttaatttacccgcaggcagtcac
atcgccttattatcaaaaaattgtgctgaatggtttattactgatctagccattatgtta
gcggggcatgtgtcagttccgatatattctactgcaggcgaaaaaacgattcagtacgtt
ttaaatcatgcatcttgcccggttatttttgttggtaaattagatgataccgcagagcaa
gtggcggcgatccctgagggcgtgactaaattagccttcccttatccgggcattgaagca
gaccaggattgggacagcctaatggcaaatgagccctatatggagcgcccagtacctgaa
ttagacagtaccatgacgattatttatacctcagggagtacgggcaatcccaaaggtgta
gtgcacacttataattccattagttgggcagcaagcaactctaaaaacgaattgaatgtg
ggggcagatgaccgcatattgagttatctaccgttagcacatattactgagcgtgtactt
gttgagatggctagcttttatgcaaatacccagatcggttttattgagtcacttgatacc
tttaatcgcgatatttgccatttacgaccaacgctctttatatccgtaccgcgactttgg
acaagattccaaatgggcgtattagcaaacatgcctcagaagaaactcgattttcttctg
aagataccgtttattggcaatattgtagcgggtaaaattagaacgaaacttggcttagac
aaagcgcgcatgtgtgccagtggttcagcgccaatatcgccagccacgttaaaatggttc
ttaaacattggggtgaaaatatcggaaggctggggcatgacagagaacagtgcctacggc
acctgttgtgtgccctttagagaagacaaaattggtagtatcggtcgtgcctatgaaggt
gtagacattcgaattggtgatgaaggcgagatccaagtaaaagggccttgtaatatgcaa
gaatactatttggagccagataaaaccgctgaaacattcactgatgatggctatctaaga
acaggtgataaaggtgagatagacagtgatggctatgtgaaaattacagggcgattaaaa
gaaatattcaaaactgccaaaggaaaatatatcgcccctgtgcccatcgaagcgctgatt
atgggaaattcttctgttgagcaggtgtgtgttacaggatcgcagttaaagcaacctatc
gcgttaattgtgttgtctgaagatgcggcaaaacaagacgaagataaaattgaaaagagt
ctgctggcaacgttggagtcggttaatagtggtttagaaagtcacgcagtgctagaccgg
tttgtgatcatgaaagatgattggactgtcgataacggccttctgactccaacccttaaa
atcaagcgtcacttattggaagaaaagtatgatgcgttaataaatgacacacagaaggga
aagctgatataccagagctaa
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