Paraglaciecola mesophila: FX988_02228
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Entry
FX988_02228 CDS
T06389
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
pmes
Paraglaciecola mesophila
Pathway
pmes03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmes00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FX988_02228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmes03021
]
FX988_02228
03400 DNA repair and recombination proteins [BR:
pmes03400
]
FX988_02228
Enzymes [BR:
pmes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FX988_02228
Transcription machinery [BR:
pmes03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FX988_02228
DNA repair and recombination proteins [BR:
pmes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FX988_02228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
QHJ11987
UniProt:
A0A857JLY6
LinkDB
All DBs
Position
complement(2598993..2599265)
Genome browser
AA seq
90 aa
AA seq
DB search
MARVTVEDAVDKIGNRFDLVLVAARRARQLAIEGKVAHVSVGTDKPTVVALREIEEGHVT
ASTLDAENLRDQHAQDQAQFESVANILQDQ
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcgtaacagttgaagatgccgtagataaaattggcaatcggtttgatttggtt
ttagtcgcagcacgccgcgcaagacaacttgcgatagaaggtaaagttgcccatgtatcg
gtaggtactgataagcctacagttgtagcgctacgtgaaatcgaggaaggacacgtaact
gcttctacacttgatgctgaaaacttgcgtgaccaacatgctcaagaccaagctcagttt
gagtctgtagcaaatattctgcaagaccagtag
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integrated database retrieval system
