Paraglaciecola mesophila: FX988_02407
Help
Entry
FX988_02407 CDS
T06389
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pmes
Paraglaciecola mesophila
Pathway
pmes00300
Lysine biosynthesis
pmes00470
D-Amino acid metabolism
pmes01100
Metabolic pathways
pmes01110
Biosynthesis of secondary metabolites
pmes01120
Microbial metabolism in diverse environments
pmes01230
Biosynthesis of amino acids
Module
pmes_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pmes00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FX988_02407
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FX988_02407
Enzymes [BR:
pmes01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
FX988_02407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Glyco_hydro_101
Motif
Other DBs
NCBI-ProteinID:
QHJ12156
UniProt:
A0A857JKT5
LinkDB
All DBs
Position
2777590..2778837
Genome browser
AA seq
415 aa
AA seq
DB search
MDFFGYKNEKLYAEDVSLQDIAQTHGTPCYVYSKATIERHWLAFDKAAGTHPHLVCYAVK
ANSNLGVLSVLAKLGSGFDIVSGGELLRVLKAGGDPTKVVFSGVGKTPEEIALGLKHNIK
CFNVESPAELERISQVAVAENKIAPISIRVNPDVDAKTHPYISTGLKANKFGIEREQAVE
VYRHAASLPNLEIKGIDCHIGSQLTEIAPFVDALDKLLVLIDELAENGITLAHLDVGGGL
GVTYKDETPPHPDEYTQAIAQRMQGREDLQLIFEPGRAIMANAGVLLTKVEFLKQGAEKN
FAIVDAAMNDLIRPALYSAWQSIIPLDTSLTRDSAVYDVVGPICETGDFIGKERELAIEA
GDYLAVRSAGAYGFVMASNYNSRCKAAEIMVDKENIILVRERETLEDLWRGESTL
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggatttttttggctataaaaatgaaaaactctatgcagaagatgtatccctgcaagac
attgctcaaacccatggaaccccatgttatgtatattctaaagccactatcgagcgccat
tggttagcctttgataaagccgctggtacacacccacatttagtctgctacgcagtaaaa
gccaattctaacctaggcgtactaagcgttttggcaaagctcgggtcaggctttgatatt
gtgtcaggtggtgagttattacgcgtcctcaaagcgggtggtgaccctaccaaagtggtc
ttttctggtgtaggcaaaaccccagaagaaatcgcactgggccttaagcacaacattaag
tgctttaatgttgaatcaccagcagaactagagcgtattagccaagtcgctgttgccgaa
aacaaaattgcccctatttcaattcgtgtcaacccagacgttgacgcgaaaacgcacccc
tatatttctactggcctcaaagccaataagttcggtatcgagcgtgaacaagcagtagaa
gtttaccgtcatgctgcttcactacccaatttagaaataaaaggtatcgattgccatatc
ggttcacaattaaccgaaatcgccccatttgttgatgcgcttgataaactattagtgctt
attgatgagctagctgaaaatggcattaccttagcgcatttagatgtcggcggcggctta
ggcgtaacctacaaagacgaaacgcctcctcaccctgatgaatacacccaagccattgcg
cagcgaatgcaaggccgtgaagatttgcagctcatttttgagccgggtcgcgccattatg
gcgaacgctggggtgctattaaccaaagtagaatttttaaagcaaggcgctgagaagaat
ttcgctattgttgatgccgccatgaacgatttaattcgccctgcattatattcagcttgg
caaagcattattccccttgatacttcactcactcgtgacagcgcagtttatgacgttgtt
gggccaatatgcgaaaccggcgacttcattggcaaagagcgcgagttagcaattgaggct
ggtgattacttagcagtacgcagcgccggcgcttatgggtttgtgatggcatcaaactac
aacagtcgttgtaaagccgctgaaataatggtcgacaaggaaaacatcatcctagtacgt
gaacgtgaaacccttgaagacctatggcgcggtgaaagcacgctgtaa
DBGET
integrated database retrieval system