KEGG   Paraglaciecola mesophila: FX988_02825
Entry
FX988_02825       CDS       T06389                                 
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
pmes  Paraglaciecola mesophila
Pathway
pmes03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pmes00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FX988_02825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmes03019]
    FX988_02825
Enzymes [BR:pmes01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     FX988_02825
Messenger RNA biogenesis [BR:pmes03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     FX988_02825
SSDB
Motif
Pfam: DEAD Helicase_C ResIII ERCC3_RAD25_C AAA_22
Other DBs
NCBI-ProteinID: QHJ12567
UniProt: A0A857JNN9
LinkDB
Position
3249241..3250506
AA seq 421 aa
MQTTHLTETHFADLPINEQVVKALSAANFSHCTPIQALSLPPLLEGNDIAGQAQTGTGKT
IAFLVATFHYLLSNPQPTKKQPRAIIMAPTRELAVQIFNDAELLSQHTGLSLGLIYGGEG
YQSQREKLEEGVDIIIGTTGRIIDYYKQNIFSLAGIQVAVLDEADRMFDLGFIKDIRYLF
NRMPKPAERLSMLFSATLSYRVQELAYEHMNNPTHVQVEPERKTGTRIKEELFYPSDEDK
MALLLSLMEEEWPDKAIVFANTKHSCEKVADWLQADGHRVGLLSGDVPQNKRLKILEDFT
SGKLDILVATDVAARGLHIPMVSHVFNYDLPDDAEDYVHRIGRTGRAGQSGSSISFACER
YALNLPAIETYIEHAIPVTEYHADALIRDVTPPKPRHKKRMQNGRNPQKRHSSGSRNRRK
P
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcaaacaactcatttaaccgaaacacatttcgcggacttgcccattaatgagcaagtc
gttaaggcgttatccgccgcaaactttagtcactgcacacccattcaagcgttaagcttg
ccccctctattagaagggaatgacatagcaggtcaagcgcaaactggaaccggtaaaact
atcgcgttcttggtggcaacttttcactacttgctaagtaatccgcagcccactaaaaaa
caaccaagagccattattatggcgccaaccagagagttggccgttcagatctttaacgat
gctgaactgctaagtcaacacactggtttgtctctcggtttgatttatgggggcgagggt
tatcaaagtcaacgggaaaagctggaagaaggtgtagatattattatcggcactaccggt
cgtatcattgactactacaaacagaacatcttttcattggctggcattcaagtcgcagtg
cttgatgaagctgatcgcatgttcgacttgggcttcattaaagatattcgatatcttttc
aatcgtatgcctaagccagcagagcggttgagcatgctgttctcagcgaccttgtcttat
cgagtacaagagcttgcctatgagcatatgaacaaccctacgcacgtgcaagtagaacct
gagcgcaaaaccggcacacggatcaaagaagagctattttacccttctgatgaagataaa
atggccctgttgcttagtttgatggaagaagagtggccagataaagctattgtttttgcc
aacactaagcatagctgcgaaaaagtcgccgattggctccaagccgacggtcatcgagtg
ggcctgttaagtggtgatgtaccgcaaaacaaacgtttaaaaattcttgaagattttacc
tcaggtaagttagacatactggtggcaactgatgttgctgcgcgtgggttgcacattcct
atggtaagtcacgtttttaactacgacttaccagacgacgctgaagattatgtgcaccgt
attggtcgtaccggacgtgcagggcaaagtggtagctctattagctttgcgtgcgaacgt
tatgcgttaaatttgccagcgatcgaaacctacattgagcatgctattccggtaaccgaa
taccatgctgatgccttgatacgtgatgttacgccacctaagcctcgccataaaaagcgc
atgcaaaacggccgtaatccacaaaagcgtcactcttcaggctcgcgtaaccgtaggaag
ccatga

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