Paraglaciecola mesophila: FX988_02858
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Entry
FX988_02858 CDS
T06389
Name
(GenBank) Primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pmes
Paraglaciecola mesophila
Pathway
pmes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FX988_02858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmes03400
]
FX988_02858
Enzymes [BR:
pmes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FX988_02858
DNA repair and recombination proteins [BR:
pmes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FX988_02858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
WHD_PriA
AAA_30
nSTAND_NTPase5
ADDB_N
Pfc11_Rna14-15-ID
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QHJ12600
UniProt:
A0A857JNB7
LinkDB
All DBs
Position
complement(3285246..3287423)
Genome browser
AA seq
725 aa
AA seq
DB search
MPIIRVAVPVPKRQFFEYQHTSALAPGIRVRVPFGPRKLIGVVLETTDESQWQSDKLKAI
LDVLDDAPIFSPIQLKLCQWLSQYYQHPIGDVLHSAMPVSLRKGGSSEPKPVSFLQASTQ
GKQADPACLGKARKQQQLLAQLQQGEASYSSILAQYASTTVKALIEKGLIEQVERIPSLD
TNWLDNLNIGEKPLPNVEQAIAISQITAKIGEYASFLIEGVTGSGKTEVYLQAIENVLTQ
GKQVLILVPEIGLTPQTVERFAKRFNVPVGILHSNLTDNERLLVWQQSYAGQLPIIIGTR
SAIFTPMKYPGMLIVDEEHDSSYKQQDGLRYHARDLAVMRAAQEKIPLILGSATPALESL
NNALNGKYQHLILNERAGNASHPKQQVLDIRNQPLEFGLAKGIIERIGQHLAQESQVMLF
INRRGYAPALVCHTCGHVEECPGCNKPYTLHKQLYKLQCHHCGSAKAIPKRCQNCNSTEL
SAMGLGTEQLEQGLQTLFPQYTSVRIDSDSARGKNRLNDMLDKINRNEYQILIGTQILSK
GHHFPNVTLVVILEVDGALFSADYRAAEHLAQLVTQLAGRAGRAEKPGEMWLQTHDPSHP
LLQDLLNNGYSHFARYALLEREHAMLPPHTYQALFRAQSSDPRMANQLLMDISQQFSYSK
HVQCIGPLPALMEKRQGKFRMQLVLISSNRAALQHTLSQAMPNIEQLPLATKVRWALDVD
PQDFM
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgcccattatccgcgttgccgttcctgttcctaagcgccagttttttgaataccagcat
accagcgccttagcacccggtattcgagtacgcgttccatttgggccgcgcaagttaatt
ggtgtggtgcttgaaaccaccgacgagtctcaatggcaaagtgacaaattgaaagctatt
ttggacgtactcgacgatgcgccgattttcagcccaatacaacttaaactatgccaatgg
cttagccaatactaccaacaccctattggtgatgtactgcacagcgctatgcctgtttcc
ttacgcaaaggaggctcaagcgagcctaaaccagtaagctttctacaggcaagtactcaa
ggaaaacaagctgatccggcgtgcttaggtaaagcgcgcaaacaacaacagttgcttgcg
caattgcagcaaggcgaagccagctattccagtatccttgcccagtatgctagcaccact
gtcaaggcgctgatagaaaaaggattaattgaacaagttgagcgtatcccctcacttgat
accaattggttagacaatttgaatattggcgaaaagccactgccaaatgttgaacaagca
atagccattagccaaatcactgcgaaaataggtgaatatgcgagctttttaatcgaaggg
gtaacgggcagcggtaaaactgaagtgtatttgcaggcaattgaaaacgtactcacccaa
ggtaaacaagtacttattttagtccctgaaattggtttaaccccacaaactgtcgagcgt
tttgccaagcgttttaatgtgcccgtaggcatattgcattctaacttaactgataacgaa
cgcttactcgtttggcagcaaagttatgctgggcaattgccgatcatcattggcacccgt
tcagcgatattcacgccgatgaaatacccaggcatgctgatcgtagatgaagaacatgat
tcctcttacaaacaacaagatggcctgcgttaccatgcaagagacttagccgtcatgcgc
gccgcccaagaaaaaattccgctgatattaggctcagctaccccggcactggaatcactc
aataatgcattaaacggcaaatatcagcaccttattctcaatgaacgtgcaggcaatgcc
tcccacccaaaacaacaagtgttagatatccgcaaccagcctctcgaatttggattagcc
aaaggcattatcgagcgtattggccagcatttagcccaagaaagtcaggtgatgttgttt
attaaccggcgcggctacgcccctgcgttggtatgccatacctgtgggcatgttgaagaa
tgccctggttgcaacaagccttatactttgcacaaacaactgtataagttgcaatgccac
cattgcggcagcgccaaagcgatccctaaacgctgtcaaaactgcaatagtactgagctc
agcgcgatgggcttaggcacggagcaactcgaacaaggcttgcaaacgttatttcctcaa
tacaccagcgtacgtatcgacagtgacagcgccagaggtaaaaatcggttaaacgatatg
ctggataaaattaatcgtaacgagtatcaaattttaatcggcacacagatattgtctaag
ggtcaccactttcccaatgtaaccttggtcgtgatactcgaagtggacggtgcgctattc
agtgctgactaccgcgctgctgagcatctagcacaattagtcacacagcttgcgggtcgt
gcaggacgcgccgaaaaacccggcgaaatgtggctgcaaacccatgacccaagtcatcct
ttgctgcaagatttgctcaacaatggttactctcactttgcgcgctacgctttacttgag
cgtgagcacgccatgttaccaccccatacctatcaggccttatttcgcgctcagtccagc
gatccccgtatggccaatcagttactgatggatatatcccaacagtttagttattcaaaa
cacgttcaatgcattggacctttgcctgctttaatggaaaaacgccaagggaagtttcgc
atgcaattagtgttaatcagcagtaatcgtgcagcattgcaacatacattaagccaggct
atgcccaatatcgaacagttaccccttgccactaaggtgcgctgggcattagatgtcgac
ccgcaagacttcatgtaa
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