Paraglaciecola mesophila: FX988_03046
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Entry
FX988_03046 CDS
T06389
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
pmes
Paraglaciecola mesophila
Brite
KEGG Orthology (KO) [BR:
pmes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmes03021
]
FX988_03046
Transcription machinery [BR:
pmes03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FX988_03046
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KIF21A
Motif
Other DBs
NCBI-ProteinID:
QHJ12788
UniProt:
A0A857JN52
LinkDB
All DBs
Position
complement(3507281..3508264)
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AA seq
327 aa
AA seq
DB search
MSHQNSATIELDLVDDIEEAVEKELVKAEKESEDTFKDIVSSKDAPSKNLDATQLYLGEI
GFSPLLSAEEEVYFSRRALKGDEASRQRMIVSNLRLVVKIARRYNNRGLALLDLVEEGNL
GLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKELNVYLRTSREL
AQKLDHEPTAEEIAEAVQKPVADVTKMLRLNERITSVDTPIGSDNDNVLLDIIADDNGHD
PEEDLQDKNVKLSIVGWLEDLNPKQREVLARRFGLLGYEPSTLEDVGVEIGLTRERVRQI
QVEALRRLKDMLGHKGLSLESLFNQLA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatcaaaacagcgctaccatagaattagatcttgtcgacgacatcgaagaagcc
gttgaaaaagaattagtcaaagcagagaaagagtctgaagatactttcaaagatatcgtc
tctagcaaagatgccccgagtaagaacctcgatgccacccagttatacctcggtgaaatt
ggcttttctcccctgctctcagcagaagaggaagtctatttttcacgcagagccctcaaa
ggcgacgaagcctcccgacagcgcatgatagtcagtaatctgcgattagtcgtcaaaata
gcaagacgctacaacaaccgagggttagctctactcgacctggttgaagaaggaaattta
ggtcttatcagagccgtcgaaaaattcgaccctgagcgtggatttcgcttttctacttat
gcgacttggtggatacgtcaaacgattgaacgcgcgataatgaaccaaacccgcaccatt
cgcttacccattcatgtggtgaaagagctaaatgtttatctacgtacgtctcgcgagtta
gcgcaaaagttagatcatgaacctaccgcagaagaaatcgccgaagcagtacaaaaacct
gttgcagatgtgacaaaaatgctgcgcttaaatgagcgtattacatctgttgatacccct
atcggcagtgataatgacaatgtattacttgacattattgctgatgacaatggtcacgat
cctgaagaagacttacaggataaaaatgtaaaattgagcatagtcggttggttagaagat
ttaaatcctaagcaacgtgaagtgctcgctagacgctttggtttgttgggctatgagcca
tcgacacttgaagatgtaggtgtagaaattggcttaacgcgagagcgtgttcgccagatc
caagttgaggccttgcgtagactcaaagatatgttgggtcacaaagggctaagcttagag
tctctgtttaatcaactggcttaa
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