Paraglaciecola mesophila: FX988_03051
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Entry
FX988_03051 CDS
T06389
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pmes
Paraglaciecola mesophila
Brite
KEGG Orthology (KO) [BR:
pmes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmes03016
]
FX988_03051
Enzymes [BR:
pmes01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
FX988_03051
Transfer RNA biogenesis [BR:
pmes03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FX988_03051
Prokaryotic type
FX988_03051
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Phage_cement_3
Motif
Other DBs
NCBI-ProteinID:
QHJ12793
UniProt:
A0A857JLN0
LinkDB
All DBs
Position
complement(3511685..3512737)
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AA seq
350 aa
AA seq
DB search
MQINQWHYLHSEPEAKGIFKQQPDDFIVQEILGYAPLGEGEHIYLWVRKEGLNTAYLAEQ
IAKFAQLPLRAVTYAGRKDKHSVSEQWFGVHKPGKAEYDWTKLDVPGATVLKAIRHNKKL
RTGVLKGNKFTILLRDVIETDALEKRIEQVNISGVPNYYGPQRFGDSRYDPKGSNLVLAE
KMLEGEAIRNRNKRSMAISALRSWLFNEVVSERIAAGYFNQPLQGDVMSLAGNASYFVSE
HIDESIKQRLADRDIYISGPLWGKGELASTGTALALEKSVISKHPKVSKTLADLGLEQER
RPIVLYPSNLTWTWQQNNLRISFDLPSGTFATSILREILHIESIDTGNNE
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcagattaaccaatggcactatctacatagcgaacccgaagctaagggcatattcaaa
cagcaacccgacgatttcatcgtccaagaaatactcggctatgctccccttggtgagggc
gagcatatatatttgtgggtacgaaaagaaggcttaaatactgcctacctagcagaacag
atcgctaagtttgcacagctgccattacgcgcagttacctatgcaggccgcaaagacaaa
cactccgtcagtgagcagtggtttggcgtgcataaacccggtaaagctgagtatgattgg
acgaaacttgacgtacccggtgcaacagtcttaaaagccatccgccacaataagaagttg
cgaacgggagtgttgaaaggcaataaattcactattctactgcgtgatgtcatagagaca
gatgcactggaaaagcgcatcgaacaagtgaatattagcggcgttccaaattattacggc
cctcaacgctttggcgacagccgttatgatcccaaaggcagtaatttggtgctagcagaa
aaaatgctcgaaggtgaagccattcgtaaccgcaataaacgttcaatggcaatttctgcc
ctgcgctcatggttgtttaacgaagtagtcagcgagcgcattgccgctggttatttcaat
cagccactgcaaggtgatgtgatgtcactagcaggcaatgctagttactttgttagcgag
cacatcgacgagagtatcaagcagcggttagccgaccgagacatctatatatcgggaccg
ttatggggtaagggagagcttgcatccacaggtacagcgttagcgcttgagaaaagtgtg
attagcaagcaccccaaagtcagtaaaaccttagcagatttaggtttagaacaagaacga
cgtccaattgttttgtatccaagcaatctcacttggacttggcagcagaataacctgcgt
atttccttcgatttaccctcgggtacttttgctacgtctattttgcgggagatcttgcat
attgaatcaatcgatacaggtaacaacgaatga
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