Paraglaciecola mesophila: FX988_03064
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Entry
FX988_03064 CDS
T06389
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
pmes
Paraglaciecola mesophila
Pathway
pmes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FX988_03064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmes03019
]
FX988_03064
Messenger RNA biogenesis [BR:
pmes03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FX988_03064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
QHJ12806
UniProt:
A0A857JMR6
LinkDB
All DBs
Position
3524343..3524867
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AA seq
174 aa
AA seq
DB search
MIDAEGFRANVGIVICNSLGQVFWARRYGQHSWQFPQGGIDEGETAEQTMYRELYEEVGL
KPEHVKILAVTKNWLRYKLPKRLIRQGSAPVCIGQKQKWFLLQLTCKEHDVDLLQSGHPE
FDDWRWVSFWYPVRNVVSFKREVYRRAMKEFAPTAMALSAKPAHSQKNKRRRKN
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
gtgattgatgccgaaggattccgcgccaacgttggcatagtgatttgtaatagcttaggt
caggtcttttgggcccgccgctatggtcaacattcttggcagtttccgcaaggcggaatc
gatgaaggtgaaactgctgaacaaaccatgtaccgcgaactttatgaggaagtgggtcta
aaaccagaacatgtaaaaattttagcggtaaccaaaaattggttgcgatacaaactacca
aagcgcttgatccgtcagggaagtgcacctgtttgtatagggcagaaacagaagtggttt
ttgttacagctaacctgtaaagagcatgatgttgatctgctgcaatctgggcatcctgag
tttgatgactggcgctgggttagtttttggtaccccgtgcgcaatgtggtgtcatttaag
cgggaagtatatcgcagagcaatgaaagaatttgcgcctacagcaatggcattaagtgca
aagcctgctcatagccagaaaaacaaacgtagacgcaagaattag
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