Paraglaciecola mesophila: FX988_03791
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Entry
FX988_03791 CDS
T06389
Name
(GenBank) Exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pmes
Paraglaciecola mesophila
Pathway
pmes03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FX988_03791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmes03400
]
FX988_03791
Enzymes [BR:
pmes01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
FX988_03791
DNA repair and recombination proteins [BR:
pmes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
FX988_03791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QHJ13526
UniProt:
A0A857JPX8
LinkDB
All DBs
Position
complement(4404335..4405669)
Genome browser
AA seq
444 aa
AA seq
DB search
MFSASPANRNIFTVSKLNHLARSVLESEIGQVWLSAEISNFVAASSGHWYFTLKDNRAQI
KSAMFKGANRKVMLRPKEGDKVLVRANLSIYEPRGDYQLIVEHLEPEGEGQLKRQFEALK
QALSAQGLFANENKQPLPNSISRIGLVTSATGAALHDILTVLKRRNPSVEVIIYPTQVQG
VSASRQICRAIEIANQRNEVDILIVGRGGGSLEDLWCFNEENVAWAIHYSALPIVSAVGH
EVDITIADFVADLRAPTPSAAAELVTQSQIEMLSALTAKRDRLYKNTRTLLKELQYQQQS
LTQELNTYHPKNQLRQHMQRVDNQLTAISHNMATRLMRAKQSSINLSSKLSQFSPKALLK
EQQQTHSLLLQRLTQAWQRGLEQRQLTLANASHLLDTVSPLSTLARGYSITFKDDKVVKS
QNALSKGDVITNRFADGEVKSTVK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtgcgtcacccgcaaaccgaaatatcttcaccgtaagtaagctaaatcacctc
gctcgctcggttttagaatctgaaattggccaagtttggctgagcgctgaaatatcaaat
ttcgttgctgctagctcaggacattggtatttcaccctcaaagataatcgagctcaaatc
aaaagcgcgatgttcaaaggtgctaatcgaaaagtcatgcttcgtcccaaagaaggggat
aaagtgttggtgcgggccaacttaagtatttacgaacctagaggtgactatcaactaata
gttgaacatcttgagcccgagggcgaaggccaactcaaacgccagttcgaagcgctaaaa
caagctctttctgcacaaggcttatttgccaatgaaaacaagcaaccattacctaacagc
attagccgaattggtttagtaacatctgcgacgggcgctgcactacacgatattttaacg
gtattaaaacgtcgtaacccatctgtcgaagtcattatttaccctactcaggtgcaaggt
gttagcgccagtcggcagatttgccgcgcgatagaaattgctaatcagcgaaatgaagta
gacatacttatcgtcgggcgtggcggcggctcattagaagacctatggtgctttaacgaa
gaaaatgtagcttgggctattcattacagtgcgctgcccattgtgagcgctgtgggccac
gaagtggatattaccattgctgactttgtagctgatttacgcgcccctaccccatcggca
gcagcagaattagtcactcagtcacaaattgaaatgctaagcgcattgacggctaaacga
gacaggttatacaaaaatacccgtacattgctcaaggaactgcaatatcagcagcagtcg
ctaacacaagaactcaacacttatcaccctaaaaatcaacttcgccaacatatgcagcgg
gtggataaccagctcactgctatttcccataatatggccactcgattgatgcgtgccaag
cagtccagtattaacctcagtagtaagctgtcgcagttttctcccaaagccttattaaaa
gaacagcaacaaactcatagtctgttattacagcgtctcacccaagcttggcagcgcggt
ttagagcagcgtcaattaaccctcgccaacgcaagccacttactagataccgtcagccct
ttatcaacgttagcacgagggtacagtattacctttaaagacgataaggtggtgaaaagc
caaaacgcgctttctaaaggtgatgtgatcaccaaccgttttgccgatggggaagtaaaa
agtacggttaagtaa
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