Paraglaciecola mesophila: FX988_03859
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Entry
FX988_03859 CDS
T06389
Name
(GenBank) DNA-binding transcriptional regulator NtrC
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
pmes
Paraglaciecola mesophila
Pathway
pmes02020
Two-component system
pmes02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pmes00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FX988_03859
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FX988_03859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmes03000
]
FX988_03859
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pmes02035
]
FX988_03859
Transcription factors [BR:
pmes03000
]
Prokaryotic type
Helix-turn-helix
Other families
FX988_03859
Bacterial motility proteins [BR:
pmes02035
]
Flagellar system
Flagellar assembly proteins
Others
FX988_03859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
FleQ
HTH_8
AAA_5
HTH_50
AAA_16
ATPase
AAA_7
bpMoxR
AAA
AAA_2
MCM
Motif
Other DBs
NCBI-ProteinID:
QHJ13593
UniProt:
A0A857JP16
LinkDB
All DBs
Position
4481794..4483224
Genome browser
AA seq
476 aa
AA seq
DB search
MSNILIISGRPTLGHNLNTILTFLGESSTAIAFEQAVSTLKSHPVFDAVLIDALDMELAG
ELCDKFPQQPFILVDSKDANFTSGANRVGAVDEAVTYPLLTQMLHRCQEHRRMQPNRNTT
PQNKTKLFRSLVGKSNQIQNVRHLIEQVAPTDANVLILGESGTGKEVIARNVHYLSKRGT
NPFIPVNCGAIPGELLESELFGHEKGAFTGAIGARKGRFELAEGGTLFLDEIGDMPLQMQ
VKLLRVLQERTYERVGGMKPIRCDVRVVAATHRNLEEMIEQGRFREDLYYRLNVFPIDSP
ALRERHEDIPLLLQELVSRMERENAQIKFTENAMKSLMEHSWAGNVRELSNLVERLMILY
PNQLIDVGDLPHKYRHLAVDDYEPDYPEELLEREALNALFSADAESEDDAFEESSTSTEL
PPEGINLKEYISEMEVSLISQALEQQDWVVARSAEVLGMRRTTLVEKMRKYDISKA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatattctgattatcagtgggcgacccacgctcgggcataatctgaacacaata
ttgacctttctcggtgaaagcagcacagctatcgccttcgagcaagccgtcagtacgcta
aaatctcaccctgtttttgatgctgttttaatcgatgcattagacatggagctagcaggg
gagttgtgtgataaatttccccagcagccgtttattcttgttgatagcaaagatgctaat
tttacctctggtgctaaccgggttggggccgttgatgaagcggtaacgtaccccttatta
acgcaaatgttgcatcgatgccaagagcatcgtcgtatgcaacccaaccgcaatactacg
ccgcaaaacaaaaccaaactgtttcgtagtttggtcggtaaaagtaatcaaatccaaaac
gtacgccatcttattgagcaggtcgcgccaactgacgccaatgtactgattttaggtgaa
tccggaaccggtaaagaggtgatagcgcgtaatgtgcattacctttcaaagcgaggtact
aacccttttattccggtcaactgtggcgctattcctggtgagcttcttgagagcgaatta
tttggccatgagaaaggcgcatttaccggggcgattggggccagaaaaggccgctttgaa
ttagctgaaggtggtacgctgtttcttgacgaaataggcgacatgccactgcaaatgcaa
gtaaaattgctgcgtgttttgcaggaacgcacctatgagcgcgtcggtggaatgaaaccc
attcgttgtgatgtacgagttgttgcggcgactcaccgcaaccttgaagaaatgatcgaa
caggggcgttttcgcgaagatttgtattatcgtttaaatgtgtttccaattgatagtccc
gcgttgcgtgagcgtcatgaagatattcctttactcttgcaagagcttgtctcacgtatg
gaacgtgaaaacgcacagatcaagtttaccgaaaacgccatgaagtcgttgatggagcat
agttgggcgggtaacgtccgcgaactgtctaatttggttgagcgtctaatgattttgtat
cctaaccaacttattgatgtaggtgacttaccacataaatatcgccatttagccgtagat
gactacgagcctgattacccagaagagttacttgagcgcgaagcacttaatgctttgttt
tcagctgacgcagagtctgaagatgacgctttcgaagagagcagcacgtctaccgaatta
cccccagagggcattaatcttaaagagtatatttcagagatggaagttagcttaatttcc
caagcactcgagcaacaagattgggtggttgcgcgctcagctgaagtacttggtatgcgc
cgaaccaccttagtagaaaagatgcgtaagtacgatattagcaaagcgtaa
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