KEGG   Paraglaciecola mesophila: FX988_04305
Entry
FX988_04305       CDS       T06389                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
pmes  Paraglaciecola mesophila
Brite
KEGG Orthology (KO) [BR:pmes00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmes03032]
    FX988_04305
   03036 Chromosome and associated proteins [BR:pmes03036]
    FX988_04305
   03400 DNA repair and recombination proteins [BR:pmes03400]
    FX988_04305
DNA replication proteins [BR:pmes03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    FX988_04305
Chromosome and associated proteins [BR:pmes03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    FX988_04305
DNA repair and recombination proteins [BR:pmes03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      FX988_04305
SSDB
Motif
Pfam: Bac_DNA_binding HU-CCDC81_bac_2 HU-HIG Lmo2446-like_N HU-CCDC81_euk_2 HU-CCDC81_euk_1
Other DBs
NCBI-ProteinID: QHJ14023
UniProt: A0A857JQ89
LinkDB
Position
unnamed:24785..25063
AA seq 92 aa
MNKQNVIEIMALASGITQREAKLALNAFTDAVQVTLQNNGKVSLVGFGNFSTRHRAERIG
RNPQTGEPLTIPTATIPEFKASKCLKDSCNNL
NT seq 279 nt   +upstreamnt  +downstreamnt
atgaataaacagaatgtaatagaaatcatggcgttagcctctggtatcacacagcgcgaa
gccaaattagctctcaatgcatttaccgacgcagttcaagtaacgctacaaaataatggc
aaggtgagtctcgttggcttcggcaacttctctacgcgccatcgtgctgaacgcattggc
cgtaatcctcaaacgggggagccattgacaatccccaccgctactatccctgaatttaag
gccagcaaatgcctcaaagattcatgcaataatctgtga

DBGET integrated database retrieval system