Phototrophicus methaneseepsis: G4Y79_11945
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Entry
G4Y79_11945 CDS
T07940
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pmet
Phototrophicus methaneseepsis
Pathway
pmet00521
Streptomycin biosynthesis
pmet00523
Polyketide sugar unit biosynthesis
pmet00525
Acarbose and validamycin biosynthesis
pmet00541
Biosynthesis of various nucleotide sugars
pmet01100
Metabolic pathways
pmet01110
Biosynthesis of secondary metabolites
pmet01250
Biosynthesis of nucleotide sugars
Module
pmet_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pmet00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
G4Y79_11945 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
G4Y79_11945 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
G4Y79_11945 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
G4Y79_11945 (rfbB)
00525 Acarbose and validamycin biosynthesis
G4Y79_11945 (rfbB)
Enzymes [BR:
pmet01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
G4Y79_11945 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
NAD_binding_10
adh_short
KR
NmrA
Motif
Other DBs
NCBI-ProteinID:
QPC85043
UniProt:
A0A7S8EE51
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All DBs
Position
complement(2766301..2767332)
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AA seq
343 aa
AA seq
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MKNILVTGGAGFIGSAFVRHMVNTYPEYNIITFDKLTYAGNMDNLLPVKSASNHHFVKGD
IADREAVRGAFEEYSVDTVVNFAAESHVDRSILDPNAFIMTDVVGVYALLEEARLIGVER
FLQVSTDEVYGDIEGDHFSLESDHFLPNSPYAASKAGGELMVRSYHITYGMNTVVTRGSN
TYGPYQYPEKLIPFFITEALDDRPLPVYGDGKQMRDWLHVNDHARGIDMVLHKGEAGEAY
NIAGEDLRHNIDVVHKMLELLNKPESLIKYVRDREGHDRRYAMNAEKARQLGWERQHTFD
TGLQETINWYLENEWWWRKIKSGDFLEYYKRQYADRIATASED
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatatcctggtcactgggggggcagggtttatcggcagcgcattcgtgcgccat
atggtgaacacttaccctgaatataacatcatcaccttcgataagctgacctatgctggc
aacatggataatctactgccggtgaaatcagccagcaaccatcatttcgtcaaaggggat
atcgccgaccgagaagccgtgcgcggggcttttgaagaatactcagtggatactgttgtg
aacttcgccgcagaaagccacgtggatcgcagcattctggaccccaacgccttcatcatg
acggatgtcgtcggcgtgtatgccctgctggaagaagcacgcctcatcggtgtggagcgc
ttcttgcaggtttctacagatgaggtctacggcgatattgaaggcgatcatttttcgctg
gaaagtgatcatttcctaccaaacagcccctatgcagccagtaaagcaggcggcgagctc
atggtgcgcagctatcacatcacttacggcatgaacaccgttgtgacacgtggcagcaac
acctatggcccttatcaatatcctgaaaagctgattccgttcttcattacggaagcactg
gatgatcgcccgctgcccgtctatggagatggcaagcaaatgcgcgattggctgcacgtc
aacgaccatgcgcgtggcatcgacatggtgctccataagggtgaagccggcgaggcctat
aacatcgctggcgaagacctgcgccataacattgatgtcgtccataaaatgctggaactg
ctcaacaaaccagaatcactcattaagtatgtgcgcgaccgcgaaggccatgatcgtcgt
tatgccatgaatgcagaaaaggcgcgtcaattgggctgggaacgccagcatacatttgat
acgggcttacaagagacgatcaactggtacctggaaaatgagtggtggtggcgtaaaatc
aagagtggcgacttcctggaatattataaacggcagtatgcagaccgcatcgccacagcc
agtgaagattaa
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