Phototrophicus methaneseepsis: G4Y79_12335
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Entry
G4Y79_12335 CDS
T07940
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pmet
Phototrophicus methaneseepsis
Brite
KEGG Orthology (KO) [BR:
pmet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmet03032
]
G4Y79_12335
03400 DNA repair and recombination proteins [BR:
pmet03400
]
G4Y79_12335
Enzymes [BR:
pmet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
G4Y79_12335
DNA replication proteins [BR:
pmet03032
]
Prokaryotic type
DNA Topoisomerases
G4Y79_12335
DNA repair and recombination proteins [BR:
pmet03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G4Y79_12335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QPC80505
UniProt:
A0A7S8IBJ0
LinkDB
All DBs
Position
2849760..2850764
Genome browser
AA seq
334 aa
AA seq
DB search
MSRLRYVSTDEPGYSRKPWGQGFTYRDQDGQTVNDPDLREWFESIVIPPAWTDVWISPYK
NGHILATGRDDKGRKQYIYHPDWGKVRDQKKFDQLYEFGQSLPKIREVTDQHLRHRNVTR
DRVLAALVRLLEMTLIRVGNDEYAKKNDSYGLTTLTDDHAEIDGGTVTFDFVGKSGKEHS
IVLKDRRLARVVKRCQDIPGYELFQYYDENGDHRVVDSADVNDYLHEITGKSFTAKVFRT
WGGSTLAIQYLCEQCDETESESATRACVSHVADMLGNTKAVSRQYYIHPIIMDAHLDGTL
DQIYAQQQKKKPRSDYDLTPEERTLMTLIEQRMS
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtttacgatatgtttctacagatgaaccgggctacagtcgtaagccatgggga
cagggatttacctatcgcgatcaggatggacagactgtgaacgaccctgatctgcgcgaa
tggtttgagtcgattgtgatcccaccagcatggacggatgtatggatcagtccctataaa
aatggtcatattctggcgacgggccgtgatgataaaggccgtaagcaatatatctatcac
ccggattggggtaaggtacgcgaccagaaaaagtttgatcaattgtatgaattcggtcaa
agcctgcccaagatacgcgaagtcacagaccagcatttacggcacaggaacgtcacacgg
gatcgtgtgctggcggcactggtacgcctcctggagatgacgctaatccgtgtcggtaat
gatgaatatgctaaaaagaatgattcctacggattgacgacgctcactgatgaccacgcc
gagattgatggcggtactgtgacctttgatttcgtgggcaagagcggtaaagaacattca
atcgtccttaaagatcgccgtctggcgcgtgttgttaagcgctgtcaggacatccccggt
tatgagttgttccaatattatgatgaaaatggcgatcatcgcgtggtcgattccgcagat
gtgaatgattacctgcatgagatcacagggaagtcctttacggcgaaagtgttccgtacc
tggggcggctcgacactagcgattcaatatttgtgtgaacaatgcgacgaaacagaatcg
gaatcggcgacacgggcttgtgtgtcacacgtcgcggatatgttgggcaataccaaggcc
gtttctcgtcagtactatatccatcccattatcatggatgctcatctggatggtacgctt
gatcaaatttacgcccaacagcagaagaaaaagccgcgttccgattacgacttgacccca
gaagagcgaacgctcatgacgctgattgagcagcgaatgtcatga
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