KEGG   Phototrophicus methaneseepsis: G4Y79_14400
Entry
G4Y79_14400       CDS       T07940                                 
Name
(GenBank) RtcB family protein
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
pmet  Phototrophicus methaneseepsis
Brite
KEGG Orthology (KO) [BR:pmet00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pmet03016]
    G4Y79_14400
Enzymes [BR:pmet01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     G4Y79_14400
Transfer RNA biogenesis [BR:pmet03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    G4Y79_14400
 Prokaryotic type
   tRNA splicing ligases
    G4Y79_14400
SSDB
Motif
Pfam: RtcB
Other DBs
NCBI-ProteinID: QPC80899
UniProt: A0A7S8E5Z9
LinkDB
Position
3335785..3336960
AA seq 391 aa
MTQETPMLYPVWGREQIDDASIAQMDAAVQLPIAVAGALMPDAHVGYGLPIGGVLATEGA
VIPYAVGVDIACRMRLSVYDVKGRMIEAHEERLKNALKEQTLFGAGKAFRGRERAEHAVL
DEDTWLYTPLLKGLKDKAVGQLGTSGSGNHFVEFGLFEVLQPQNALGLPEGEYAALVSHS
GSRGVGYAIADHYSKLAIELHPELDKSVRHLAWLDMDSGYGQEYWRAMDLAGRFAAANHE
VIHQRVAKAIGWDVLATVENHHNFAWEEEHGGQSVIVHRKGATPAGKGVLGIIPGSMGDA
GYIVEGLGNEASLHSASHGAGRLMSRSQARKTITRSMIKSYLGERRITLMGGDTDEAPHV
YKPIDQVMAAQTELVKVIGKYSPRIVRMDGK
NT seq 1176 nt   +upstreamnt  +downstreamnt
atgacacaagaaacgcctatgctttatcctgtttggggccgagaacaaattgatgatgcc
tccattgcgcagatggatgccgctgttcaactgccaatagcggtggctggcgcattgatg
ccagatgctcatgttggctacggcttgcccatcggaggcgtcctggcgacggaaggcgcg
gtgattccttatgcggttggtgttgatattgcctgccggatgcgattatctgtttacgat
gtcaaaggtcgtatgattgaagcccatgaggaacgcctgaaaaatgcgctaaaagagcag
acgctcttcggcgcgggaaaagcgtttcgtgggcgtgaacgggctgaacatgcggtgctc
gatgaagacacatggctttatacacccttgcttaagggcctaaaagataaggccgtcggg
cagctagggacaagtggttctggcaatcattttgtcgagtttggtttgtttgaagtgctg
caaccgcagaacgcgcttggcttgccggaaggtgaatatgcggcactggtttctcattcg
gggtctcgtggggtcggctacgcgattgcggatcactattctaagctggcaatagagcta
cacccagaattggataaatcggtgcggcatctggcatggctggatatggacagcggctac
ggtcaagaatattggcgggcgatggaccttgcagggcgctttgccgcggccaaccacgaa
gtgattcatcagcgggtggcaaaggctatcggctgggatgtgctggcaaccgtcgaaaat
catcacaacttcgcctgggaagaagaacacggcggtcaatctgtgattgtgcatcgcaaa
ggcgcgacgcctgccgggaaaggtgtacttggcattattcccggttctatgggggacgct
ggctatatagtagaagggctgggtaatgaggcgtctttgcattctgcttcgcatggggca
gggcggctgatgagccgcagccaggcgcgtaaaaccattacacggagtatgattaaatct
tacctgggtgaacgtcgtattacgctgatgggcggtgatacggatgaagcgccccatgtt
tacaagccgattgatcaggtcatggcagcgcagacggaacttgttaaggtcattggtaaa
tattcgcctcgtattgtgcggatggatgggaagtag

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