Phototrophicus methaneseepsis: G4Y79_15510
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Entry
G4Y79_15510 CDS
T07940
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pmet
Phototrophicus methaneseepsis
Pathway
pmet03030
DNA replication
pmet03430
Mismatch repair
pmet03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G4Y79_15510
03430 Mismatch repair
G4Y79_15510
03440 Homologous recombination
G4Y79_15510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmet03032
]
G4Y79_15510
03400 DNA repair and recombination proteins [BR:
pmet03400
]
G4Y79_15510
Enzymes [BR:
pmet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G4Y79_15510
DNA replication proteins [BR:
pmet03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G4Y79_15510
DNA repair and recombination proteins [BR:
pmet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G4Y79_15510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
RNase_T
DEAD
DEAD_2
ResIII
Rv2179c-like
Helicase_C
DNA_pol_A_exo1
PhoH
T4SS-DNA_transf
Sigma54_activat
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
QPC81109
UniProt:
A0A7S8E6C6
LinkDB
All DBs
Position
complement(3570227..3573001)
Genome browser
AA seq
924 aa
AA seq
DB search
MRGELVAFDLETTGLDIQNDAIIEIGAVRIVDGVIDAEYSTLINPGFAIPQETTYITGID
QRDVKDAPSLNMILPDFQRFVGDAPVIAHNAMFDVGFMRRYGMLTGNSPIDTVELASILM
PQLPRYNLGSLVKLLDIDLENAHRALDDARATGKLYWLLWQKALNLPPSVIQEIARYGSG
IDWDLNVFFKACAAETAQTGNGEFAIDFAENEQSIIPDRAAQTPSSRALITKEEIASILG
PEGKLSQTINNYEYREQQVSMADSVADAFNNQQHVMIEAGTGTGKSLAYLVPAALWATEN
KERVVISTNTINLQEQLIQKDIPLLHDVIEQPFTAAVMKGRGNYLCPRRLAAMRRRLPTS
IDELRMMVKLLVWLSETNTGDRGEITLRGNENYIWTRLSAQDEGCTTRRCIASMHGTCPY
HQARQRAEAADLLVVNHALLVSDALNANGQTLPPYQHVIIDEAHQLEDAVTNGLNTRIDQ
VTLAQRLAELGGANRGLMGDILNQLRGAAPDKTVMKLEAFTQNVDMAVKAMLVHVTRFFE
TLADFVNDTGQNNKSQIRITESSRTLSEFTRVQIRWEQLSEFFDVIADAMTHILGTLHDL
ESSSIDIDDQINSVAATARYLSDVRHQIDAFANDADDNTVYWIHNAQYSDYIAIQTAPQH
AGRYIEETLWQRKETIVLTSATMQTGNDFAYMKDRLHAERLRASTVGSPFDYEKSAMIYI
PEDMPEPNRPNYQKMVERGIINLATALNGRVMVLFTSYSQLKETATNIAARLALGDIVVY
DQATGTSRESLLDNFKSTEKAVLLGTRSFWDGVDIPGEDLSALVIVRLPFAVPTDPVFAA
RSEMYDDAFHNYAVPNAILRFRQGFGRLIRTQHDRGIVTIFDSRIINKKYGSQFLEALPA
CTVQRGPLDNLGAAAQHWLSTTKA
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggcgaactcgttgcatttgacctcgaaacgaccggcctcgatatacaaaacgac
gccattatcgaaatcggagcagtgcgtattgtcgatggcgtcattgacgctgaatacagc
acgctcattaacccagggtttgccatcccacaggaaacaacctacatcacaggtattgat
cagcgagacgttaaagacgccccatcgctgaatatgatcttgccagatttccagcgattc
gtcggtgacgcgcctgtcatcgcgcacaatgccatgtttgacgttggtttcatgcgccga
tatgggatgcttacgggtaattcgcccatcgatacagtcgaacttgcctccatcctgatg
ccacagttaccacgctacaatctgggtagtctggtaaaactgcttgatatcgacctggaa
aatgcccatcgtgcattggatgatgcccgtgcgacaggaaagttatactggttactctgg
caaaaagcgctgaatctgcccccttctgtgatccaggagatcgcacgctatggcagcggc
attgattgggacctaaatgtcttttttaaagcctgtgctgcggagactgcccaaacaggt
aatggtgaatttgccatcgactttgcagaaaatgagcaaagcatcattccagaccgggca
gcgcaaaccccctcatcgcgggccctcatcacaaaagaagaaatcgcttctattcttgga
cctgagggcaaactctctcagacgatcaacaattatgaataccgtgaacaacaagtttcg
atggcagattctgttgcagacgcatttaacaaccagcagcatgtcatgattgaagctggt
acaggcacaggcaagtcactggcctatctggtcccagcagccctatgggccacagaaaac
aaggaacgcgtcgtcatttccaccaatacgatcaatctgcaagagcagctcatccagaaa
gatattccgctgctgcatgacgtgattgaacagccatttaccgccgcagtcatgaaaggc
cgcggtaactatttatgcccccggcggctcgcagccatgcgacgcagattgccaacaagc
atcgacgaactgcgcatgatggtcaaattgctcgtctggctcagtgaaacgaacacagga
gatcgcggcgagatcaccctgcgcggcaacgaaaattacatctggacacgacttagcgcg
caggatgaaggttgcacaacacgtcgctgtatcgccagcatgcatggcacctgtccctat
catcaggctcggcagcgtgcagaagccgctgatttacttgttgtcaatcatgctctactc
gtctcggatgctctcaatgcaaatgggcagacactgccgccataccagcatgtcatcatt
gatgaagcccaccagctagaagatgccgttaccaatgggctcaacacgcgtatcgaccag
gtgacgctagcacagcgccttgcggagcttggtggcgcaaatcgtggactgatgggcgat
attctcaatcagctacgcggtgctgcccctgacaagaccgtcatgaaattagaagctttt
acgcagaatgtcgatatggctgtaaaagcgatgcttgtccacgtgacgcgcttcttcgaa
acgttggccgattttgtgaacgatacaggccagaacaataaatcgcagattcgcatcaca
gaatccagccgcacgctcagcgagtttacacgggtgcaaatacgttgggagcaactatct
gagttcttcgatgtcatcgcagatgccatgacgcatatcctgggcacattacatgatctg
gaaagcagttcgattgatatcgatgaccagattaatagtgttgcagcaacagcacgctat
ttatccgatgtccgccatcaaattgatgctttcgccaatgatgcagacgataatacggtt
tactggatccataatgcccagtattcagattatattgctatccagacagcaccccagcat
gctggccgatacatcgaagagacgctctggcaacgtaaagaaacgattgtgctcaccagt
gctaccatgcaaacgggcaacgactttgcctatatgaaagaccgattacacgcagagcgt
ttaagggcatcaacggtcggctcaccatttgactatgagaagtcagccatgatatatatt
ccagaagatatgccagagccgaaccgtccgaactatcagaagatggttgagcgtggcatc
atcaacctggcaacagcgctcaatggtcgtgtgatggtgctcttcacgagctacagccaa
cttaaagaaacagcgactaacattgctgcgcgcctcgctctgggtgacatcgttgtctat
gatcaggcgacaggcaccagtcgagaatcactgttagataactttaagtcgaccgagaaa
gccgtacttctgggtacacgcagcttttgggatggcgttgatatacctggcgaggacctc
agtgcactcgtcatcgttcgactgccctttgctgtaccaacagaccctgtttttgcagcc
cggtcagaaatgtatgatgacgcatttcataattatgctgtaccgaacgctattttgcgc
ttccggcaaggctttggacgcctcatccgtacacagcatgatcgtggcattgttaccatc
ttcgacagccggatcatcaataagaaatatggcagccaatttttagaggcgctcccagca
tgtaccgtgcaaagaggcccattggataacctgggcgcagcagcacaacattggctctca
acaacgaaagcgtaa
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