Phototrophicus methaneseepsis: G4Y79_18075
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Entry
G4Y79_18075 CDS
T07940
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pmet
Phototrophicus methaneseepsis
Brite
KEGG Orthology (KO) [BR:
pmet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmet03032
]
G4Y79_18075 (gyrA)
03400 DNA repair and recombination proteins [BR:
pmet03400
]
G4Y79_18075 (gyrA)
Enzymes [BR:
pmet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
G4Y79_18075 (gyrA)
DNA replication proteins [BR:
pmet03032
]
Prokaryotic type
DNA Topoisomerases
G4Y79_18075 (gyrA)
DNA repair and recombination proteins [BR:
pmet03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G4Y79_18075 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
SNaCT13
Motif
Other DBs
NCBI-ProteinID:
QPC81582
UniProt:
A0A7S8IDH9
LinkDB
All DBs
Position
complement(4190350..4192935)
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AA seq
861 aa
AA seq
DB search
MDNENFSDNVGTIRPININEEMRGSYLDYAMSVIVSRALPDARDGLKPVHRRILFAMYDM
GVRAGSAHKKSARIVGEVLGKYHPHGDSAVYDAMARMAQDFSLRYPLVDGQGNFGSQDGD
SPAAMRYTEARMARIAEEMLADINMDTVDFTDNYDGSQQEPIVLPSRLPNMLLNGASGIA
VGMATNIPPHNMRELAAAINYLIDNYENMEEIAVDDLMTFVKGPDFPTGAQIIVGDDLKE
AYATGKGRVAIRSTAEIEETKSGSMRIIFTSIPYQVSKTSIVERIVSLVREGRLEAVRDL
RDESDRNGLRLVVELKKYAQPLTVLNQLYKYTQLQTFYSIQMLALVNNEPRNLSLKRSLQ
IYIEHRYDVIVRRSEYELERLQARAHILLGLLKAVTNIDDVIRTIRQSQDVDDARTQLME
RFELTEVQATAILDMQLRRLAALERQKLQDEYDEVMARIDYLEDLLRSPYKILALIRDDV
NEIAEKYGDERNTEVVYGNADFDESDLVREEQVIISLTSQGYIKRVPSRLYRAQRRGGKG
VRGMTTKEEDLLIDIFASSSLDTLLFFSDAGKVYSEKAYRIPETGRANRGTLIHAVLPLA
PTEHITAVLPVSTFDMEEAYFVMATRMGRIKRVHLHEFEAVRPSGLIAMSLNEDDTLSWV
KYTTGDQDIIMVTEQGQSILFHESDVRVMGRPAGGVNGIKLLDDDRVAGMDVINPDLHTH
IMVVTQNGFGKRTPIEDYSRQSRYGLGARTLSRNNRTGPIVAMRAINEDDGIMLISRSGI
VLRTSLAQVRETGRSTQGVTVMNLGEGDEVVAMAIMAEEDDDLPESGDGVESNGASPDGA
MPDGASLDGASEDSGSEDDVE
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggataacgaaaattttagcgacaacgtgggcacgattcgcccaatcaatattaacgaa
gaaatgcgtggcagttatctcgattacgccatgagcgtcatcgtcagtcgtgcactgcca
gacgcgagagatggccttaagcctgtacatcggcgcatcctctttgcaatgtacgatatg
ggtgtacgagcaggttccgcacataagaagagcgcccgtattgtcggtgaagtgctgggt
aaatatcatccccatggtgatagtgccgtttatgatgcgatggcccgtatggcgcaggat
tttagcctgcgttatccgcttgtcgatggacagggtaacttcggcagccaggatggggat
agcccggcggcaatgcgttatacagaagcccgtatggcgcgtattgctgaagaaatgctg
gccgatatcaatatggatacggtcgatttcacggataactacgatggtagccagcaggag
cctatcgtcctgccatctcgcttaccaaacatgctgctcaacggcgcgagcggtatcgcg
gtgggtatggcgaccaatatcccgccgcataacatgcgcgaactggccgctgcgatcaat
tatctgatcgataactatgaaaatatggaagaaatcgcggtcgatgacttgatgacattc
gtcaaagggccggatttcccaacgggcgcgcagatcatcgtgggggatgacctcaaagag
gcctacgcgacgggtaagggccgcgttgcgattcgctcaacggcggaaatcgaggaaacg
aagagcggttcgatgcgcatcatctttacatcgatcccgtatcaggtcagcaagaccagc
attgtcgagcgaattgtttcgctcgtgcgggaaggccgcctggaagctgtccgcgacctg
cgtgatgagagtgatcgcaacggtttacgcctggtggtggagcttaagaaatatgctcag
ccgctgacggtgctcaatcaactctataaatatacgcagctccagactttctacagcatc
cagatgctggcacttgtcaataatgagccgcgcaaccttagccttaagcgctcactacaa
atctatatcgaacatcgctacgacgtgattgtgcgccgcagtgagtacgagttggaacgc
ttgcaggcccgcgcccacattctattgggtttgcttaaggctgtgaccaatattgatgat
gtcatccgcacaatccggcagtcacaggatgtggatgatgcccgtacgcagttgatggaa
cgttttgaactgacagaagttcaggctacggcgatcctggatatgcaactgcgccgtctg
gctgctctggaacgtcagaagctgcaagatgaatacgatgaagtcatggcgcgcattgac
taccttgaagatttgttgcgcagtccctacaaaatccttgcgcttatccgcgatgacgtc
aatgaaattgcggagaaatatggtgatgagcgtaatacggaagttgtctatggcaatgcg
gacttcgatgaatccgacctggtgcgcgaagaacaggttatcatctcgctgacgagccag
ggttacatcaagcgcgtaccgtctcgcttatatcgtgcccagcgacgcggcggcaagggc
gtccggggtatgacgaccaaagaagaagatctgctgatcgatatttttgcgtcgagcagc
ttggatacgctgcttttcttcagcgatgcaggcaaagtctattcagaaaaagcctatcgc
atcccggagacggggcgtgccaaccgaggcaccctcatccatgcggttttgccgctcgca
ccaacggagcatattacagcggtgctgcctgtcagcacgttcgatatggaagaagcgtac
ttcgtcatggcaacgcggatgggacgtatcaagcgtgtgcatttgcacgaatttgaagcg
gtgcgtccaagtggcttaatcgctatgagcctcaacgaagatgatacgctgagttgggtg
aagtacaccaccggcgaccaggatattattatggtcacggagcagggacagagcattctg
ttccatgagagcgatgttcgtgtgatgggacgtccagcaggtggtgttaatggcatcaag
ctgctggatgacgaccgcgtggcgggtatggatgtcatcaatccagacctacatacgcat
attatggtcgtaacgcagaacggcttcggcaagcggacgccaattgaggattattcccgc
caatcgcgttatggtttgggtgcgcggacgctatcccgcaataatcgtacaggcccgatt
gttgccatgcgtgctatcaatgaagatgatggtattatgctcatctcacggtctggcatc
gtcttgcgtaccagcctggcacaggttcgtgaaacaggccgcagcacgcagggcgtcacg
gtgatgaacctgggtgagggcgatgaagttgtggcgatggcgattatggctgaagaagat
gacgacctgccggaatcaggggatggcgtagaatcaaatggcgcttcgcctgatggggcc
atgcctgacggtgcctcacttgatggcgcttccgaggacagcggttctgaggacgacgtc
gaatag
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