KEGG   Phototrophicus methaneseepsis: G4Y79_18990
Entry
G4Y79_18990       CDS       T07940                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pmet  Phototrophicus methaneseepsis
Pathway
pmet03030  DNA replication
pmet03410  Base excision repair
pmet03420  Nucleotide excision repair
pmet03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pmet00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    G4Y79_18990 (polA)
   03410 Base excision repair
    G4Y79_18990 (polA)
   03420 Nucleotide excision repair
    G4Y79_18990 (polA)
   03440 Homologous recombination
    G4Y79_18990 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmet03032]
    G4Y79_18990 (polA)
   03400 DNA repair and recombination proteins [BR:pmet03400]
    G4Y79_18990 (polA)
Enzymes [BR:pmet01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     G4Y79_18990 (polA)
DNA replication proteins [BR:pmet03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     G4Y79_18990 (polA)
DNA repair and recombination proteins [BR:pmet03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     G4Y79_18990 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     G4Y79_18990 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1 HHH_5 HTH_19 NYN_YacP
Other DBs
NCBI-ProteinID: QPC81755
UniProt: A0A7S8E7G8
LinkDB
Position
complement(4386936..4389677)
AA seq 913 aa
MSERPVLYLIDGHAVAYRQYFALQRVPMSTQAGEPTAAVFGFTRQLLDILRDIRPEYLAV
SFDEGLSARDEWYPDYKGTREKMPDDLSTQMVRIRQVVETLNIPVLTMDNSEADDVIGTI
ARQAEAQGVDVHIVTGDRDILQLLTPHVRVQLPSRKGPDKVYDVDVFIELYALHPTQLID
LKALMGDSSDNIPGVKGVGKKTATKLLQEYDTLDGIYGHIDDIKGSMQKKLIAEKDMAYL
SQKLATIITDLNITLHLDACMTHDYDPMAVDALFSELDFNSLRQEFRALHEDVQFDPSPD
MTTVIVDTEEKLADMVAVLDAAAAIVWDVETTSVDQMSADLVGIALAVDGKTGYYVPVGH
KNPGSGTLFEEQVQQQLPMQTVLDAIRPALTNPNIAKIAHNASYDLVMLRRYGIDVSPIE
FDTMIAEWMRDPISNNLSLKRFALSELGVTMTEISELIGTGKKQITMAEVAIEDAAPYAA
ADATVTYRAAKLLRPQLQELGVEKLYHDLEIPVIPVIADMEQAGALLDTPFLNEMSGILA
EKIDALQTQICGYAENDAFNPSSPKQLNEVLFEKLKLPTDGIRKTSQGYSTNITTLEALM
DAHAIVPLIVEYRELTKLKGTYVDALPQLINPKTGRVHTNYNQTGTSTGRFSSSNPNLQN
IPIRTELGREVRRSFIAPEGMHLLAVDYSQIELRVMAHVSGDEGLKEAFREGQDIHRATA
AAVNSIEPEDVTYEQRSFAKRVNFGLMYGMGAFRLARDSNLTLAEAEAFIRTYFERFPGV
KRYMEDVERSAREKGYVETLLGRKRFFPQLGSGSSGQQAQSELRAAINMPIQGTAADILK
LAMIKLHAALKEGDYPARMILQVHDELVLEVEEDALEETTKLVVETMQNAYPLDVPVVAN
ASCGPNWLDMTDL
NT seq 2742 nt   +upstreamnt  +downstreamnt
atgtcagaacggcccgttttgtatttgattgatggacatgcagtcgcttatcggcagtac
ttcgctttgcagcgggtgcctatgagtacccaggctggggaacctacggcggcggtcttc
ggctttacgcgccaattattggatattctgcgcgatattcggcctgaatatctggctgta
agctttgatgagggcctgagtgcacgtgatgaatggtatccagattacaaaggcacgcgt
gagaaaatgccggacgatctttctacgcagatggtgcgcatccggcaagtggtcgaaacg
ctcaatatccctgtgctgacgatggataacagcgaagcggatgacgtgattggcaccatt
gcccgtcaggcagaagcccagggcgttgacgtccatattgtgactggcgaccgcgacatt
ctacagttgttgacgccgcatgtacgcgtgcaactgccatcgcgcaaaggaccggataag
gtctacgatgtggatgtatttatagagctttatgctttgcatccgacgcagcttatcgac
ctcaaagcgctgatgggcgatagcagcgacaatatccctggtgtgaagggcgtcggcaag
aaaacagcgaccaaactattgcaggaatacgatacgctcgatggtatttatggtcatatt
gatgatattaaaggcagcatgcaaaagaagctgattgctgagaaagatatggcatatctc
agccagaagctggcgactatcatcacagacctgaacatcacgcttcatctggatgcatgc
atgacgcatgactatgatccgatggcggtggatgcgttgtttagtgagctagacttcaat
tcgttgcgccaggaattccgtgccctgcacgaagatgtgcagtttgatccgtctcccgat
atgacgaccgtgatcgtcgatacagaggagaaactcgcggatatggtcgctgtgcttgat
gccgctgcggccatcgtctgggatgtggagacgaccagcgttgaccagatgtctgctgat
ctggtggggattgctttggctgttgatggcaagactggctattacgtaccggttgggcat
aagaatcctggttcgggtacgctctttgaagaacaagtgcagcagcaattaccgatgcaa
accgtattggatgccatccggccagcattgaccaacccgaacattgccaaaatcgcccat
aatgcttcctacgatctggttatgttgcgacggtatggtattgatgtgtcgcccattgaa
tttgacaccatgattgcggagtggatgcgcgatcctatcagcaacaacttgagcctgaag
cgcttcgccctgagcgaactgggtgtcacgatgacggaaatctcagaactcatcggcacg
ggcaaaaaacagatcaccatggcggaagtcgccattgaagatgcggcaccttatgcggct
gcagatgcgactgtcacgtatcgtgcagccaagctgctgcggccccaattacaagagcta
ggcgtagaaaagctctaccacgatttagaaatccccgtaattccggttattgcggatatg
gagcaggcgggggcgctgttggatacgccgtttttaaatgagatgagcggcatcctcgca
gaaaaaattgacgccctgcaaacgcaaatttgtggatacgctgaaaacgatgctttcaac
cctagcagccccaaacaactcaacgaagtgctctttgagaagctcaagctgccaacagat
ggcattcgtaagaccagccagggctattctacaaatatcacgacgctggaagccttgatg
gatgcgcacgctattgtgccgctcatcgttgaataccgcgaactgaccaagcttaagggc
acgtatgttgatgcgctgccgcaactgattaaccctaagaccgggcgtgtgcataccaac
tacaaccagacgggcacatcgaccgggcgttttagcagcagtaacccgaacttacagaac
atcccgattcgtacagaattgggccgagaagtgcggcggtctttcatcgcgccggaaggc
atgcatttgctggcagtggactacagccagattgaactgcgcgtcatggcccacgtcagc
ggcgatgaggggcttaaagaagccttccgcgaagggcaggatattcaccgggcaacggct
gcagctgtgaacagcatcgagccagaagatgtgacctacgaacagcgcagctttgccaag
cgcgtgaactttggcctgatgtacggcatgggggctttccgcctggcgcgggatagcaac
ctgactttggcggaagcagaagcttttatccgcacctattttgagcgattcccaggtgta
aaacgctatatggaagatgtagaacgctccgcacgagaaaagggctatgtagaaacgctg
ctcggtcgcaaacgcttcttcccacagttgggctccggtagttccggccagcaagctcaa
tctgagttacgcgcggcgataaatatgcctatccagggcacggcggcggatattctaaag
ctggcaatgattaagctccatgctgctctaaaagaaggggattatcccgcacggatgatt
ttgcaggtgcatgatgaactggtgcttgaagtcgaagaagatgctcttgaggagaccaca
aagctcgtcgttgagacgatgcagaatgcttatccgttggatgtgcccgtcgtagccaat
gccagttgtggccccaattggctggatatgaccgacctttag

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