Phototrophicus methaneseepsis: G4Y79_19060
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Entry
G4Y79_19060 CDS
T07940
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pmet
Phototrophicus methaneseepsis
Brite
KEGG Orthology (KO) [BR:
pmet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmet03400
]
G4Y79_19060
Enzymes [BR:
pmet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G4Y79_19060
DNA repair and recombination proteins [BR:
pmet03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
G4Y79_19060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
ADDB_N
UvrD-helicase
UvrD_C
DUF2800
DUF3638
Cas_Cas4
DEAD
Motif
Other DBs
NCBI-ProteinID:
QPC81769
UniProt:
A0A7S8E7I1
LinkDB
All DBs
Position
complement(4406949..4410236)
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AA seq
1095 aa
AA seq
DB search
MTTTVLQAQVGAGKTALALRQLLAVMQAQSQRLPRIWVLLATKRQEFAFRERMLAELATT
DPIAFFNVEFFNFYELNNRLLNLAGEPPRKINEAARLGILRQVLAGLNQSQDLPFYGSIA
HTAGFLRVVASLIDELKQNRVTPEQYSAAAQAPKDHELAMIYAQYQALLQQGHLADREGE
SWLALESVERHVQLASDVDLLLIDGYDQFTPVQAMLVAALSQRVGQALITLTGLPASVQR
VGLRFQQALQQLQSAHEALGTSFTVQQPALDPHPHRQPDLNHLARQLFASQNLQVQPNDR
DSVHLIEAPEPAEETAAVLRAVKQKLLQGQAAPEDILVVVRDWHRYQHDIETYTRLYDLP
VLRHFAQPIYENPAIVALMRLLQLADVQRPERGFRRRDVLDVLRSPYLAIPGFMDVTWVD
LLDRISREKAVISGWAEWETALDPASGAVVALDEDADEEADYLASVDELSDLSLSLETFF
GQVTPPAMATVEEYVAWVDALLGSDSLDDGDQGEWYDGVQPEPKHYAVLHCIREGADAHL
IRRDVAAIHSLKRLMRGMLETDVLLQSIHMAPQTVSWGAFLADLQLAIKNAMPEAGKANR
SGRVLITGATEARGLPHQHVYILGMAEGVFPMPASEDPLYLDSERRALTARGVMLRPGNE
RSDDDGLFYELVNLAQATLTLSRPTVRDGKAWNPSHLWRRVCDAFVPDSLWTTRYGVGET
VPALESAALDEVLLAAVSEAQNGVRAYLIQQHSDLWAHVMHNIQVEQGRLSRQPHDAYTG
KLSHPALVAQVQDELGLQRQWSASQLNEYGTCAFRFFASRFLKLEALEEPEEGMDALQLG
SLNHAILEQTYRQLGRDGIAISPDSVACAEALDILEEVAQICFVKAPREYGFRPTARWQQ
EQQVILRRLQLMIQLDFSESAPLPGADRLPYDMELRFGFANSPQVAIPINDEERIYVRGS
IDRVDRIGDTLYVIDYKSGSTQIPLREMETGRNFQMMVYLLALEDILRQRGETNLRVGGG
FFWHIRNQKDSGKVDMDVHFESIEAARKHLTRHLHHARQGDFRVQPGKVDNARCTSYCDF
YQLCRLSVTNQYKYP
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaaccgtgttgcaagcgcaggtcggtgcggggaagaccgcgctggcactgcgc
caactgctcgctgtgatgcaagcgcaatcacagcgattacctcgtatctgggtgctgtta
gcgacgaaacgccaggaattcgcttttcgggagcggatgctggcagaattggcgacgacg
gaccctatcgctttctttaatgttgagtttttcaatttttatgagcttaacaatcgtttg
ctcaatttggccggggagccgccgcgcaaaatcaatgaagctgcgcggttgggcattttg
cggcaggtgctcgctggcttgaaccagtcccaggacctgcctttttatggcagtattgcc
catacggccgggttcttacgcgttgttgccagcctcattgatgagctcaagcaaaaccgt
gtgacgccggagcaatattcagccgcagcacaggccccaaaagatcacgaattagccatg
atctatgcgcaatatcaggcacttttgcagcaaggccatctggcggatcgtgaaggcgag
agctggttggcgttggaatctgtcgagcggcatgtgcagcttgccagcgatgtcgatttg
ttgttgattgatggttacgatcaatttacacctgtgcaggcgatgctggttgcagcactg
tcacagcgtgtgggtcaggcgctcatcaccctgacggggctgcccgcctctgtacagcgg
gttgggctacgctttcagcaggctttgcaacaattacagagtgctcatgaggccctgggc
acatcttttacggtgcagcagcccgcccttgatcctcacccacatcgtcaacctgatctg
aatcacctggcgcggcagttattcgctagccagaatttgcaggtgcagccaaacgaccgt
gattctgtgcacctcattgaagcgccagaacctgccgaggaaacagccgcagtgctgcgt
gcggttaagcaaaagctcttgcaagggcaggcggcaccagaggatatactggttgtggtg
cgcgattggcatcgctatcaacatgatattgagacgtatacgcggctgtatgatttgcct
gtgctgcgtcacttcgcccaaccgatttatgagaatccggctattgtggcgctgatgcgc
ttgttgcaacttgctgatgttcagcggccagaacgcggctttcgtcggcgtgatgtgctc
gatgtgctgcgctccccttatttagccataccgggcttcatggatgtgacctgggttgac
ttgctggatcgcatcagccgggagaaagcggtcatcagtggttgggctgaatgggaaacg
gcattggaccctgccagtggtgctgtggttgcgctcgatgaagatgctgatgaagaagca
gactatctcgccagtgtggatgaactcagtgatctatctctgagtctggagacattcttt
ggtcaggtgacgccgcctgccatggcgacggttgaagaatatgtcgcctgggtagacgca
ctgcttggctccgacagcctcgatgatggtgatcagggtgagtggtatgacggcgttcag
ccagagccaaagcattatgcggtgctgcactgcatccgcgaaggggctgatgcccatctg
atacggcgcgatgtcgcagcgatccatagcctgaagcgccttatgcgcggcatgctagag
acggatgtgctgttgcaatctatccatatggccccacaaacggtttcctggggcgctttt
ttggcagatttgcaattagctatcaaaaatgcgatgccggaggcaggtaaagccaatcgt
agcgggcgtgtgctgatcacaggagcgacagaagcacgcggcttgccgcatcagcatgtc
tatatcctggggatggcggagggcgtcttcccgatgcctgccagcgaagatccgctgtat
cttgatagtgagcgccgagcattgactgcacgtggcgtgatgttgcgtcctggcaatgaa
cgcagtgacgatgacggccttttttatgaacttgtcaatttggctcaggcgacgttgacg
ctctcaaggccgaccgtgcgcgatggcaaagcctggaaccctagccacctctggcggcgg
gtctgcgatgctttcgtaccggatagcttgtggacgactcgatatggtgtgggcgagaca
gtgcctgctctggaaagtgcagctctagacgaggtgctgttggcggctgtctctgaggcg
cagaacggtgtacgcgcttatctgatacagcagcacagtgatttatgggctcatgtgatg
cataacatccaggttgaacagggccgactttcgcgtcagccacatgacgcctataccggc
aagctctcgcatccggcattggtggctcaggttcaagatgagttggggctacagcgccag
tggagtgccagccagctcaatgaatatggtacgtgtgcctttcgcttcttcgccagccgc
ttcctcaaattagaagccctggaagaaccagaagaaggcatggatgcgctgcaactcggc
tcacttaatcacgctattctggagcagacctatcgccagttgggccgggacgggatcgcc
attagcccggattcagtcgcttgtgcggaagcgctcgatatcctggaagaagtggcccag
atttgctttgtaaaggcccccagagaatacggtttccgtccgacagctcgttggcagcag
gagcagcaggtcattttacgccgtttgcagttgatgattcagcttgattttagcgaaagc
gcgccgctccctggtgcggaccgtctgccatacgatatggagctccgctttgggtttgcg
aatagtccacaggttgcaatccccatcaatgacgaggagcgtatctacgtccgaggctcc
atcgaccgtgtggaccgcattggcgacacactctatgtcattgactataaatcgggcagt
acgcaaattcccctcagagagatggaaacaggccgcaacttccagatgatggtttacttg
ctggcgctggaagatattttgcgccagcgaggtgagacgaatttacgagtcggcggcggc
ttcttctggcatatccgcaaccagaaggacagcggcaaggtcgatatggatgtgcatttt
gaatccattgaagcggcgcgcaaacatctgacgcgacatctccaccatgcgcggcagggc
gatttcagggttcaacccggcaaggtcgataatgcccgctgcacaagctactgtgatttt
taccagctttgccgcctgagcgtgacgaatcaatataaatacccatag
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