KEGG   Phototrophicus methaneseepsis: G4Y79_19210
Entry
G4Y79_19210       CDS       T07940                                 
Symbol
alr
Name
(GenBank) alanine racemase
  KO
K01798  Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
Organism
pmet  Phototrophicus methaneseepsis
Pathway
pmet00300  Lysine biosynthesis
pmet00470  D-Amino acid metabolism
pmet00550  Peptidoglycan biosynthesis
pmet01100  Metabolic pathways
pmet01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:pmet00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    G4Y79_19210 (alr)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    G4Y79_19210 (alr)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    G4Y79_19210 (alr)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    G4Y79_19210 (alr)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:pmet01011]
    G4Y79_19210 (alr)
Enzymes [BR:pmet01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.1  alanine racemase
     G4Y79_19210 (alr)
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.10  UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
     G4Y79_19210 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:pmet01011]
 Precursor biosynthesis
  Amino acid ligase
   G4Y79_19210 (alr)
  Racemase
   G4Y79_19210 (alr)
SSDB
Motif
Pfam: Ala_racemase_N Ala_racemase_C Mur_ligase_M Mur_ligase_C
Other DBs
NCBI-ProteinID: QPC81799
UniProt: A0A7S8E7J7
LinkDB
Position
complement(4452321..4454879)
AA seq 852 aa
MISLYDFLNAANGQLFGEPAAQLFTNFCLDPYLADSSTLFVALQTPRGNTDQYIEEAIQR
GAGGVVCTHPPDCETDGVSVVMVRDPFDAMIAWSKYILKKYTPHIVAVSGSSAKSVAVKA
IAHLLSQKYGVHGGDIDVSGLLNIPLSLANMRPDDEYLVLKFDVEKPGDMADLLEIASPD
IAVICHIDCYHPSTFTSCNQLLDEYRMLVKAVPEQGLVVLNADDAQAAELAETVTAPVRT
VAMDVFGADLMAYNILTDTARTGFDLRFGSERFVARWIPLLGKFHLYSALAALAVGQYAG
VPLDRGLRALTKLTPIAGRLSPLRGTGGAALIDDSYSANMISTHGALEWLSDVKYEHQAV
VILGDMDDLADHTQLGHRAVGIQAAQVADVLITLGAQAAQAARSAVDHGMDSQSVFSAYS
VEEVLNAVRRYHLTKDDIVLIKGGREARMEHITRALLDNPEDEPNTVRYMPQVEETDEHP
GSQTLYTSWIEVDTAILGDNIGIIRNMLADHVTLCAVIKADAYGHGAVATAHVALQSGAT
YLAVASMTEALELRDAGIEAPILILTYTPLHAIRQAVRSNLTVTIFDLEQARAYDRAVRD
MRDPLKYHVKVDTGMGRMGVLARDALHMFRYLAALSHMQLEGIYTHFSVADEDLDFTREQ
VAQFKRVVQAVRASGFDVTYAHCANSAGVLQGPEFHMDMVRPGVMMYGMAPAPGLQLPPG
INPALSWKTTVLQVKTLPAGHNVGYGNAYTTQETEKIAILPVGYADGLRRSPRSWQSVLI
RGQRAPLIGRVSMEKATVSVQHIAGVVPGDEVVLLGSQGDDAITADEVARWLGTINYEVV
TNILRHVPRTIS
NT seq 2559 nt   +upstreamnt  +downstreamnt
atgataagcctttacgattttctcaatgctgctaacggacaactctttggggaaccagcc
gcacagttgttcacaaacttctgcctggacccttacttagctgatagttcgaccttgttc
gtggcgctacaaacaccacgcggcaatacagaccagtacatcgaagaagccatccagcgc
ggtgcagggggtgtcgtttgcacgcatccgccagattgtgagacggatggcgtctccgtc
gtcatggtacgtgatccgtttgatgccatgatcgcatggtcaaagtacatcctgaagaaa
tacacaccgcatattgtcgccgtgagcggttcctccgctaaatcggttgctgttaaggcg
attgcacatctgctgagccagaaatatggcgtgcatggcggcgatatagatgtcagcggg
ttgctgaacattccactttcactggcgaatatgcgcccagatgatgagtacctggttttg
aagttcgacgttgagaaaccgggtgatatggccgatctgttggaaattgcatcgccagat
attgccgtaatctgccatattgattgttatcatccttctacgttcacaagctgcaatcag
ttgttagacgagtatcgtatgctcgtcaaagccgtgcctgaacaaggccttgtggtgctc
aatgccgatgatgcccaggcagctgaattggcagagactgtgacggcaccggtgcgcact
gtcgcgatggatgtcttcggcgctgacttgatggcttataacatcctaacggatacagcg
cgcacaggttttgatttacgctttggcagtgagcgcttcgtcgctcgttggattccgttg
ttgggtaagtttcacctgtatagtgccctggcggctttggcagtcggccagtatgccggg
gtgccattagataggggcctgcgtgcgctcaccaaattgacgcctatcgcgggccgttta
tcgcctctacgcggtacaggtggcgctgccctgattgacgatagctattctgccaatatg
atctctacccatggcgcgcttgagtggctttctgatgtcaaatatgagcatcaggccgtt
gttatcctgggcgatatggatgatctggcggatcatacgcagctagggcaccgggctgtg
ggcattcaggcggcacaggtcgctgatgtgctcattacattaggcgctcaggcggcccag
gccgcgcgctctgctgtggatcacggtatggattcccaatccgttttctcagcgtatagt
gtcgaagaagtgctgaatgctgtacgacgctatcatctgacgaaggacgatattgtgctc
atcaagggcgggcgagaagctcgcatggagcatatcacgcgcgcgctgttggataacccg
gaagacgagcctaatacagtccgctacatgccccaggtggaagaaacagacgaacacccc
ggctcgcaaacgctctataccagttggattgaggtcgataccgcaatccttggggataac
attggcatcatacggaatatgctggcggaccatgtgacgttgtgcgctgttatcaaagcc
gatgcatatgggcatggggctgtcgcaacagcacatgtggctttgcagagtggggcgact
tatctagcggtggcatccatgactgaggcgctagagctgcgagatgcaggcattgaagcg
cctattctgattttgacctatacacccctgcatgcaatccgtcaggcggtgcgctccaat
ctgactgtgacgatttttgatttggagcaggcgcgtgcttacgaccgtgcagtgcgcgat
atgcgcgatcctctgaaatatcatgtcaaggtcgatacaggtatgggacgtatgggcgta
ctggcgcgtgatgcgctgcacatgttccgctatctggcggcgctcagccatatgcagtta
gagggcatttatacacacttttccgtggctgatgaagacctcgattttaccagagagcag
gttgcacaattcaagcgtgtggtacaggctgtgcgcgccagcggctttgatgtgacgtat
gcgcactgtgcgaattcagcgggtgtgctgcaaggcccggaatttcatatggatatggtg
cggcccggtgtgatgatgtatggcatggcccctgcgcccgggttgcagttgccccctggt
atcaacccggccttaagctggaagacaactgttttacaggttaaaacgctgccagcaggg
cataacgtcggctatggtaatgcctataccacacaggaaactgaaaaaatcgccattttg
cccgtcggctatgcagatggtttacggcgttcgccgcgctcctggcaatccgtcctcata
cgcgggcagcgtgcgcccttgattggccgcgttagcatggaaaaagccaccgttagcgtg
cagcatatcgcgggcgttgtaccgggcgatgaagtcgtcctgctgggttcgcagggggat
gatgctatcaccgccgatgaagtcgcgcgctggttaggtacgatcaattatgaagtggtg
acgaatatcttgcgtcacgtgccgcgcaccatatcgtga

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