Phototrophicus methaneseepsis: G4Y79_19535
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Entry
G4Y79_19535 CDS
T07940
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pmet
Phototrophicus methaneseepsis
Pathway
pmet03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G4Y79_19535 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmet03400
]
G4Y79_19535 (mutM)
Enzymes [BR:
pmet01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
G4Y79_19535 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
G4Y79_19535 (mutM)
DNA repair and recombination proteins [BR:
pmet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
G4Y79_19535 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn-ribbon_8
Ribosomal_S13
DUF5440
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QPC81859
UniProt:
A0A7S8E7N6
LinkDB
All DBs
Position
4532726..4533547
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AA seq
273 aa
AA seq
DB search
MPELPEVETVVRGIRPNLIGKTIMSLWTDWPRSLNTTTEDEFEARIAGQQITDVCRRAKY
IIIALDDTYLMIHLKMTGRLYVTPASEYHDADRWVHVKFGLDTGEELRFSDSRKFGRVYV
TNSIEDITGQLGPEPLEDDFTLEVFKSRFITRKRVLKALLLDQTFVAGIGNIYADEALFR
AKIHPERRSDSLSDAEVARLYDTIRAALMDGIQYEGASITWYRKPDGTKGDSQNHFYAYG
RDGQPCLECGTIMEKIRVAQRGTHFCPTCQSLS
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccggaagtcgaaacggtcgtacggggcatccgtccgaatttgatcggc
aagacgatcatgagtttatggacagattggcccagatcactgaatacaaccacagaagat
gagtttgaagcgcgcatcgcaggccagcagattaccgacgtctgtcgtcgcgcaaaatac
atcatcattgccttagatgatacctatctcatgatccatctcaaaatgacaggccgactc
tacgtcacacccgcatcagaatatcatgatgcagatcggtgggtacacgtcaaatttggg
ttggatacaggcgaagaactgcgttttagcgatagtcggaagttcgggcgcgtttacgtc
acaaacagtatcgaagatatcacaggccaattagggccagaacctctggaagatgatttt
acgctggaagtgttcaaatcacgcttcataacgcgtaaacgggtcttaaaagccctgctg
ctagatcagacatttgttgccggaattggaaacatttacgctgatgaagcccttttccgt
gcgaaaatacatccagagcgccgttccgatagcctgagcgatgcagaagtcgcccgcttg
tatgacaccatacgagccgcgcttatggacggcattcaatatgaaggcgcaagcattacc
tggtatcgcaagccagatggcacgaagggtgattctcagaaccacttttacgcctacgga
cgtgatgggcaaccctgcttggaatgcggcacgatcatggaaaagatccgtgtcgcccaa
cgaggcacgcacttttgcccgacgtgccaatcgctgagttaa
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