Phototrophicus methaneseepsis: G4Y79_20675
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Entry
G4Y79_20675 CDS
T07940
Name
(GenBank) HRDC domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pmet
Phototrophicus methaneseepsis
Brite
KEGG Orthology (KO) [BR:
pmet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmet03016
]
G4Y79_20675
Enzymes [BR:
pmet01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
G4Y79_20675
Transfer RNA biogenesis [BR:
pmet03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
G4Y79_20675
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
CarD_C
Motif
Other DBs
NCBI-ProteinID:
QPC82072
UniProt:
A0A7S8E825
LinkDB
All DBs
Position
complement(4806949..4808097)
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AA seq
382 aa
AA seq
DB search
MSVPKLPAAIYIDNTNDLRTLVQRLSQETLIALDTESNSMHAYRGRVCLVQLSTRQQDYI
IDPLAIDDMQPLGDLLLNPAIEKIFHAAEYDLICMQRDFDFGIANVFDTMLAARVLGIPS
VGLGDMLHEFFDVTVDKRHQLDDWGQRPLPQDSLIYAQMDTHYLPRLRDALEERLIKTGH
LEEAQEVFRDLMLIDVEEKAFDPDGYWKIGRPRALNRREMTFLKELYLVRDAIAQEEDVP
PYKVFTNKTMIYMAQRPPANLTDLFNLRDLSGYYVREYGSDILEAIERAQDNKPPRPPRV
ERRKPIIVERYSALHAWRKETAEQRAIDSSLVLPKQILWTIAEEMPLNMNALSAINGMGE
WRLNQYGEAILDVIHQMNGSSS
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgccgaagctcccggcagcaatttacatcgacaacacaaacgacctgcgcact
ctggtccaaagactttctcaggaaacattgatcgcgctcgatacggaatccaacagtatg
cacgcgtatcgaggccgggtctgtttggtgcagctttcgacgcgccaacaagactatatc
attgaccctctggctattgatgatatgcagcccctcggcgatttactgctcaacccagct
attgagaaaatcttccacgcggcagaatatgacttaatctgcatgcagcgtgattttgat
ttcggcatcgcgaatgtgttcgatacgatgctggcggcgcgtgttttggggattccttct
gttggcctgggggatatgctgcacgagttcttcgatgtgacagtggataagcgccatcag
ttggatgattgggggcagcgccctctgccgcaggacagcctgatctacgcgcaaatggat
acgcactatctgccgcgtttgcgcgatgctctggaagagcggctcatcaagacaggccac
ctggaggaagcacaagaagtcttcagggatttgatgctgattgatgtggaagaaaaagct
tttgacccggatggctattggaagattggacgtccgcgtgcgctcaatcggcgggagatg
accttcctcaaggagctatatcttgtgcgagatgccatcgcccaggaagaagatgtgccg
ccttacaaggtcttcaccaacaaaacgatgatttatatggcccaaaggcccccggcgaat
ctgaccgatctgtttaacctgcgggatttgtctggttattatgttcgcgagtatggtagc
gacattctggaagccattgagcgcgcacaggataacaagccaccgcgcccgccacgggtt
gaacgccgtaagcctattattgttgagcgctattccgcgttgcacgcatggcgtaaagaa
accgctgaacaacgtgccatcgacagcagcctggtcttgcccaaacagatcctatggacg
attgctgaagagatgcctttgaatatgaacgccttgtctgcaatcaatggcatgggggaa
tggcgcttaaaccaatatggtgaggcgattcttgatgtcatccaccagatgaatggatcg
tcttcgtaa
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