Phototrophicus methaneseepsis: G4Y79_21125
Help
Entry
G4Y79_21125 CDS
T07940
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pmet
Phototrophicus methaneseepsis
Brite
KEGG Orthology (KO) [BR:
pmet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmet03009
]
G4Y79_21125 (rimO)
Enzymes [BR:
pmet01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
G4Y79_21125 (rimO)
Ribosome biogenesis [BR:
pmet03009
]
Prokaryotic type
ribosomal protein modification factors
G4Y79_21125 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
QPC82159
UniProt:
A0A7S8E886
LinkDB
All DBs
Position
complement(4894313..4895764)
Genome browser
AA seq
483 aa
AA seq
DB search
MTTATQRRDKYFLLSLGCSKNTVDSESIAQVLNQQGMIGVSVPEEAEVLIVNTCGFINSA
KQESVDMLRQLVELKRGNQVVIAAGCLSQRYGETLVQDVPGLDGVIGTRRWMDIFDLVTR
LRQRKHPQPLYHLPTDAKVVGLDERGVLRASVQGASAYLKIADGCRRPCAFCAIPKIKGT
AVSRPMESIVAEAVRLQEIGVKEIMLIAQDSTDYGYDLGLKDGLAHLLDAICEAAPNIPW
LRIMYAYPGYVTERLMETMARHEQVLPYLDIPLQHGNREVLKRMKRPANVDWVYNTIGKM
RSIIPNLAVRTTFIVGYPGETDEEFAGLMQFVKDLQFDRVGAFTYSYELGTPSATLPDQV
HDEVKQARYEQLMGLQQGISLAKNQALVGKTLDILVEGHGAAEDEDGNDTGQTISLGRSY
RDAPEIDGYVLVEGELPPGEIVPVRITGATTYDLIATVDVQEPLVIQPGQVISEGMIDLN
NIN
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgcaacccaacgccgggacaagtattttttgctcagtctcggctgctctaaa
aacacggttgatagcgaaagtatcgcccaggtgctcaatcagcagggcatgattggcgtg
agcgtgccggaagaagccgaggtgctcatcgtgaatacctgcggctttatcaacagtgcc
aagcaagaaagcgtcgatatgctgcgccaactggttgagctcaaacgcggtaatcaggtg
gtcatcgctgccgggtgcctttcccagcgctatggggaaacgcttgtgcaggatgtgccc
ggcctggatggcgttattggcacgcgccgctggatggatatctttgacctggtgacgcgc
ctgcgccaacgtaagcacccacagccgctctatcatctgccgacagatgccaaggtagtg
ggtttggatgagcgcggtgtgctgcgtgccagcgtacagggtgccagtgcttacctgaaa
atcgctgatggctgtcgtcgtccgtgtgccttctgcgcgattcctaagattaagggcacg
gctgttagccgcccgatggagagcatcgtcgcggaagctgtgcgtttgcaggaaattggc
gttaaagagattatgctcatcgcccaggattctaccgattacggctatgatctgggcctt
aaagacggcctcgcgcatctgctggatgctatttgcgaagccgcgcctaacattccctgg
cttcgcatcatgtacgcgtatccaggttacgtgacggagcgtttaatggagacgatggcc
cgccatgagcaggtgctgccgtatctcgatattcctttgcagcatggcaaccgggaagtg
ctcaagcggatgaagcgcccggccaatgtggattgggtttataacacgattggtaagatg
cgctcgattatccccaacctggctgtgcggaccacatttatcgtgggctaccctggcgaa
acagacgaagaattcgcgggtttgatgcagtttgtcaaagatttacaattcgaccgcgtg
ggggccttcacatacagctacgaattggggacgcccagcgccacattacctgatcaggtt
catgatgaagtcaagcaggcccgttatgagcagttgatgggcttgcagcagggcatcagc
cttgcgaagaaccaggctttagtgggtaagacgctcgatattctcgtagaagggcacggt
gcggcagaagatgaagacggcaatgataccgggcagacgatcagcctgggccgcagctac
cgcgacgcacctgagattgatggttatgtattggtcgagggcgaactgcctccaggggaa
atcgtcccggtgcgcatcacgggcgcgacgacctatgacctcattgctaccgtggatgta
caagagcctctcgtgatccagccggggcaggtcattagcgaaggcatgattgatctcaac
aacatcaactag
DBGET
integrated database retrieval system
