Phototrophicus methaneseepsis: G4Y79_24400
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Entry
G4Y79_24400 CDS
T07940
Symbol
recA
Name
(GenBank) recombinase RecA
KO
K03553
recombination protein RecA
Organism
pmet
Phototrophicus methaneseepsis
Pathway
pmet03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
G4Y79_24400 (recA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmet03400
]
G4Y79_24400 (recA)
DNA repair and recombination proteins [BR:
pmet03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
G4Y79_24400 (recA)
RecFOR pathway proteins
G4Y79_24400 (recA)
TLS (translesion DNA synthesis) factors
Other SOS response factors
G4Y79_24400 (recA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecA
RecA_C
Rad51
ATPase
AAA_25
ATPase_2
AAA_24
AAA_22
AAA
AAA_16
CobU
ABC_tran
NPHP3_N
AAA_14
ATP_bind_1
CLP1_P
AAA_35
Motif
Other DBs
NCBI-ProteinID:
QPC85285
UniProt:
A0A7S8EE28
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All DBs
Position
5623617..5624654
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AA seq
345 aa
AA seq
DB search
MANGDEGRIKALDAALTDITKRYGDGTIIRLGDAAHMQVDVIPSGSLGLDIAIGVGGIPR
GRITEIYGPESSGKTTLCLHVIAEAQKRGGLCAFIDMEHALDPQYASRIGVDIERLYVTQ
PDTGEQALEIAETLVRSGALDVIVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKL
SGIVKQSGLCLLFTNQLREKIGVMFGNPETQPGGRALKFYSSVRLDIRRTQSIKSGGDVV
GNRTKIKVKKNKVAAPFREAEFDIMFFENGISKTGEIVDLGEQLGLVEKRGAFYRYNDEL
IGQGRENAKQFLMENPNIAMEIEDAIRRHYELPTLAEANAELVEE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatggtgatgaagggcgcatcaaggctctcgatgccgctctgacagatatcacc
aagcgctatggtgacggcacaattatccgtctgggcgatgctgcccatatgcaggttgat
gtgatcccaagcggctccctgggcctggatattgcgattggcgttggcgggattccccgt
ggccgcatcacagaaatctatgggccggaatcgtccggtaagacgacgctttgtttgcat
gtcattgcggaagcacaaaaacgcggcggcctatgcgcatttatcgatatggaacacgcc
ctagacccgcagtacgcctcacgcatcggtgtggatattgaacgtctctatgtgacacag
ccggatacaggcgaacaagcgctggaaatcgcggagacgctggtacgctccggtgcgctg
gatgtgatcgtggtcgatagtgtggctgcactcgtcccccgtgcggaaattgaaggcgag
atgggcgattctcatgtgggtttgcaggcccgtttgatgagccaggccctgcgtaagctc
tccggcatcgtgaagcaatccggcttgtgcctgctgttcaccaaccagctccgtgaaaaa
atcggcgtcatgttcggcaatcctgaaacacagcccggtggccgcgcgctcaagttctat
tccagcgtgcgcctggatattcgccggacgcagtcgatcaaatctggtggcgatgtcgtc
ggtaaccgcaccaagattaaggtgaagaagaacaaagtcgcggcacctttccgcgaggct
gaattcgacatcatgttctttgaaaacggcatcagcaagacgggcgaaatcgtcgacctg
ggcgagcaactcggcctggtggaaaagcgtggtgctttctaccgctacaatgatgagctc
atcggccaggggcgtgaaaatgccaaacagttcttgatggaaaaccccaacatcgccatg
gagatcgaagatgccattcgtcggcattacgaactgcccaccctggcggaagcgaacgct
gagttagtcgaagaataa
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