Pseudoxanthomonas mexicana: H4W19_00025
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Entry
H4W19_00025 CDS
T06805
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pmex
Pseudoxanthomonas mexicana
Pathway
pmex03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H4W19_00025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmex03000
]
H4W19_00025
03400 DNA repair and recombination proteins [BR:
pmex03400
]
H4W19_00025
Enzymes [BR:
pmex01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
H4W19_00025
Transcription factors [BR:
pmex03000
]
Prokaryotic type
Helix-turn-helix
AraC family
H4W19_00025
DNA repair and recombination proteins [BR:
pmex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H4W19_00025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
HTH_Tnp_ISL3
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QND80249
LinkDB
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Position
complement(4194..5693)
Genome browser
AA seq
499 aa
AA seq
DB search
MVPSDATALPDRHVCEQARLSRDARFDGLFFTAVTSTRIYCRPVCPAPAPRPHNIVYYRH
AAAAEAAGFRPCLRCRPELAPGDGTWRRGDEVVARALKLIDQGALIDASVADLAERVGLG
ERQLRRLFTDRLGATPVDVHGTRRLLFAKQLLTETTLPITQVALAAGFGSLTRFNTAFRK
EYRMAPRDLRKRELPIAGDAMTLRLGYRPPYDFGAMLDFLRGRALPGVEVVDDVSYRRVI
GTPDTPGWLRISAWDEGTHALKLELQGGAAADLLQIVNRLRRMFDLDADPQAIAAALGHD
DRLRPLLEARPGLRLPSGWDGFEIAVRAVIGQQVSVAAARTLTARLAQRHGTPLAIPFEG
LTHLFPTPEALVDADLTEIGLTRARADTIRGMSRALLDGRVDFRPERTLEDFTSRWVALP
GIGPWTAHYMALRALGHPDAFPADDLVLQKAVPTDGTRMTAKALTARAEAWRPWRAYAVI
HVWKASMPAAKPSAVVGAT
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggtcccgtccgatgccaccgccctgcccgatcgccacgtctgcgaacaggcgcgactg
agccgcgacgcgcgcttcgacggcctgttcttcaccgccgtcaccagcacgcggatctac
tgccggcccgtatgcccggcgcccgcgccgaggccccacaacatcgtctactaccgccac
gcagcggccgcagaagccgccggtttccgaccctgcctgcgctgccggccggaactcgcg
ccaggtgacggcacctggcgcaggggcgacgaagtggtagcgcgcgcactgaaactgatc
gaccagggcgcactgatagatgcatcggtggccgacctcgccgaacgcgtgggcttgggc
gaacggcagctgcggcggctgttcaccgatcgcctcggtgccacgccagtcgacgtgcac
ggcacgcgtcgcctgctgttcgccaagcaactgctgaccgagaccaccttgccgatcacg
caggtggcgctggcagcgggcttcggcagcctgacccgcttcaacaccgctttccgcaag
gaataccggatggcgccgcgcgacctgcgcaagcgcgaactgccaatcgcaggcgacgcg
atgacgctgcggctgggctaccgaccgccatacgatttcggcgccatgctcgatttcctg
cgcgggcgcgcactgccgggcgtcgaagtcgtcgacgacgtcagctatcggcgcgtgatc
ggcacgcccgatacgccaggctggttgcggatcagcgcctgggacgaaggcacccatgcg
ctgaagctggagctgcagggcggtgcggcggcggatctgctgcagatcgtcaaccgcctg
cggcgcatgttcgatctggatgccgatccgcaggcgatcgccgcggcgctgggccacgac
gaccgcctgcgcccgttgctggaggcgcggccgggcctgcgcctgcccagcggctgggac
ggtttcgagatcgcggtgcgtgcggtgatcggccagcaggtcagcgtggccgccgcgcgc
acgctgacggcgcgcctggcgcaacggcatggaacaccgctggcgatcccgttcgagggg
ctgacgcacctgttcccgacgccggaggcgctggtcgatgccgatctgaccgagatcggc
ctgacccgtgcgcgggccgacacgatccgcgggatgtcgcgcgcactgctcgatggccgc
gtcgatttccggccggagcgcacgctggaggatttcacctcgcgctgggtcgccctgccc
ggcatcggcccgtggacggcgcactacatggcgctgcgcgcgctcggccatccggatgcg
ttcccggccgacgacctggtgctgcagaaggccgtgccgaccgatggcacgcggatgacg
gcgaaggcgctgaccgcgcgcgcggaggcctggcggccatggcgcgcctatgccgtgatc
catgtgtggaaggccagtatgccggcagcgaaaccgtctgccgttgtgggagcgacgtaa
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