Pseudoxanthomonas mexicana: H4W19_01815
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Entry
H4W19_01815 CDS
T06805
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pmex
Pseudoxanthomonas mexicana
Brite
KEGG Orthology (KO) [BR:
pmex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmex03032
]
H4W19_01815
03400 DNA repair and recombination proteins [BR:
pmex03400
]
H4W19_01815
Enzymes [BR:
pmex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
H4W19_01815
DNA replication proteins [BR:
pmex03032
]
Prokaryotic type
DNA Topoisomerases
H4W19_01815
DNA repair and recombination proteins [BR:
pmex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H4W19_01815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QND80569
LinkDB
All DBs
Position
complement(355731..356726)
Genome browser
AA seq
331 aa
AA seq
DB search
MAGLLHTSDAMPGLRRQRRGRGFVYLDARGRPVRAPATLARIRRLAIPPAYTDVWICAQA
NGHLQATGRDARGRKQYRYHRDWHTERGARKYDRLLAFADALPRLRRRVRADLALPGFPR
GKVVALVVALLGQTLLRVGNASYQKANGSYGITTLRNVHARFIAGSEVRFAFRGKGGKTL
EARVDDARLVRLVRCCRQLPGQALFQYRDGDTVQRIGSGDVNAYLQEVLGGPFTAKDFRT
WGATLFAFRTLATMEVPEAEAARRQVRMQVLRDTAAILGNTPRICERCYVDPRVFEGWED
GRLQRVAANARGPRQWEQAATRFLRRARRGS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggccgggctgctgcatacctcggatgcgatgcccggcctgcgacggcagcggcgcggg
cgcggtttcgtgtacctggacgcgcgcgggcgccccgtgcgcgcgcctgccacgctggcg
cgcatccgtcgcctggccattccgccggcctataccgacgtgtggatctgcgcgcaggcc
aacggacacctgcaggccaccggccgcgacgcgcgcggccgcaagcagtaccgctaccat
cgcgactggcataccgaacgcggcgcacgcaagtacgaccgcctgctcgccttcgccgac
gccctgccccgcctgcgccgacgcgtccgcgccgacctggcactgccagggtttccgcgc
ggcaaggtcgtggcgctggtggtggccctgctgggacagaccctgctgcgcgtgggcaac
gccagctaccagaaggccaacggctcctacggcatcaccacgctgcgcaacgtgcatgcg
cgcttcatcgcaggcagcgaagtgcgcttcgccttccgcggcaagggcggcaagacgctg
gaagcgcgcgtcgacgatgcacgcctggtgcggctggtgcgctgctgccggcaactgccc
gggcaggcgctgttccagtaccgcgatggcgacaccgtgcaacgcatcggctccggtgac
gtcaacgcctacctgcaggaggtgttgggcggcccgttcaccgcgaaggatttccgtacc
tggggtgccacgctgttcgccttccgcacactggcgacgatggaggtgcccgaggcggaa
gcggcccgtcggcaggtccgcatgcaggtcctgcgcgacaccgccgccatcctcggcaac
actccgcgcatctgcgagcgctgctatgtggacccgcgcgtgttcgaaggctgggaagac
ggccgcctgcagcgcgtggcggcgaatgcgcgtggcccccggcaatgggaacaggcggcg
acccgcttcctcaggcgcgcacgccgcggttcatga
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