Pseudoxanthomonas mexicana: H4W19_03565
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Entry
H4W19_03565 CDS
T06805
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pmex
Pseudoxanthomonas mexicana
Pathway
pmex03410
Base excision repair
pmex03430
Mismatch repair
pmex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H4W19_03565 (recJ)
03430 Mismatch repair
H4W19_03565 (recJ)
03440 Homologous recombination
H4W19_03565 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmex03400
]
H4W19_03565 (recJ)
DNA repair and recombination proteins [BR:
pmex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
H4W19_03565 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
H4W19_03565 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
H4W19_03565 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
QND80887
LinkDB
All DBs
Position
718216..719937
Genome browser
AA seq
573 aa
AA seq
DB search
MTPTARIRRREAGAAGTWPAHVPMLLQRVYEARGAGSMEQAQPRLAQLLPPDLLGGIDEA
TTLLADAIAANRHIVIVGDFDCDGATACAVGVRGLCLLGARRVTPAVPNRMVHGYGLSPS
LVEELDALAPELLVTVDHGIACHAGIAAAKARGWQVLVTDHHLPGDVLPPADAIVNPNLR
GDPFPSKVLAGVGVMFYVLLALRRLLRERGAFDGPEPDLSSLLDLVAVGTVADLVPLDAN
NRALVGAGLRRLRAGQACAGLQALVRVAGRDPARLTAADIGFAVAPRLNAAGRLEDMALG
IACLLTDDASQADEMARVLDGINAERRGVQQQMVDEAQAALARVDVEGAVPLAPCLFDPE
WHPGVVGLVASKIKERLHRPVIAFAPAEPGSTVLRGSARSIPGFHIRDALAAIDAANPGL
MQRFGGHAMAAGLSLDESALSAFREAFHEQASKLLDEAMLQEVLLSDGELRSDELDRAHA
EALRGAGPWGQGFPEPMFDGYFDVLDWRVIGEKHLKFSLRLPGHAAALNAIHFNGWQDQA
PPARIHAAYQLDTDDWQNRRGIQLLIRYWQAAE
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgacggcccggatccgccgacgcgaggcgggcgcagccggtacatggccggcc
catgtgcccatgctgctgcaacgcgtctacgaggcccggggagccggttcgatggagcag
gcccagcccaggctcgcccagctgcttccccccgacctgctcggcggcatcgatgaagcg
acgacgctgctcgccgatgccatcgcggccaaccgccatatcgtgatcgtcggcgatttc
gactgcgacggcgccaccgcgtgcgccgtcggcgtgcgtgggctttgcctgctgggcgca
cggcgtgtcacgccggcggtgcccaatcgcatggtgcatggctacggactgtcgccttcg
ctggtggaggaactggacgcactggcgcccgaactgctggtcacggtggaccacgggatt
gcctgtcatgccggcatcgcggcggccaaggcacgcggctggcaggtcctggtgacggat
catcacttgcccggtgacgtgctgccgcctgccgatgcgatcgtcaatcccaacctgcgt
ggcgatccgttccccagcaaggtgctggcgggcgtgggcgtgatgttctacgtgctgctc
gcgctgcggcgcctactgcgggagcggggggctttcgacggccccgaacccgacctttcg
tccttgctggatcttgtcgcggtgggcacggtcgccgatctcgtcccgctggacgccaac
aaccgcgccctcgtcggcgccggcctgcgtcgcctgcgcgcaggccaggcctgtgcgggc
ctgcaggcgctggtgcgcgtggcggggcgtgacccggcacgactcacggctgcggacatc
ggcttcgcggtcgccccgcgcctgaatgccgcgggacggttggaggacatggcgctcggt
atcgcgtgcctgctgaccgacgacgccagccaagccgatgagatggcgcgcgtgctcgac
ggcatcaacgccgaacgccgcggcgtgcagcagcagatggtggacgaagcgcaggcggcg
ctggcgcgtgtcgacgtcgaaggcgccgtgccgctggcgccctgtctgttcgacccggag
tggcatccaggcgtggtcggcctggtggcctcgaagatcaaggaacgcctgcatcgcccg
gtgattgcgttcgcgcccgccgagccgggcagcacggtgttgcgcggctcggcacgctcc
attcccggtttccacatccgggatgcgctggcggcgatcgatgcggcgaaccccggtctg
atgcagcgtttcggcggtcatgcgatggcggccggcctgtcgctggacgaaagcgcactg
tctgccttccgtgaagctttccacgagcaggcctcgaagctgctcgatgaggcgatgttg
caggaagtgctgctgagtgacggcgagttgcggtcggacgaactggatcgcgcccatgcc
gaagcgctgcgcggcgccgggccatggggacagggcttccccgagcccatgttcgatggc
tatttcgatgtgctggattggcgcgtgattggcgagaagcacctgaagttttcgttgcgt
ctgccgggtcatgccgcagcgctcaatgcgatccacttcaatggctggcaggaccaggcc
ccacctgcccgtatccatgcggcctaccagctggacaccgacgactggcagaaccgccgc
ggcatccagttgctgatccgttactggcaggccgcggagtga
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