Pseudoxanthomonas mexicana: H4W19_04980
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Entry
H4W19_04980 CDS
T06805
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pmex
Pseudoxanthomonas mexicana
Brite
KEGG Orthology (KO) [BR:
pmex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmex03032
]
H4W19_04980
03036 Chromosome and associated proteins [BR:
pmex03036
]
H4W19_04980
03400 DNA repair and recombination proteins [BR:
pmex03400
]
H4W19_04980
DNA replication proteins [BR:
pmex03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
H4W19_04980
Chromosome and associated proteins [BR:
pmex03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
H4W19_04980
DNA repair and recombination proteins [BR:
pmex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
H4W19_04980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
TetR_C_30
TetR_C_15
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
QND81131
UniProt:
A0A7G6UQ34
LinkDB
All DBs
Position
complement(1032545..1032850)
Genome browser
AA seq
101 aa
AA seq
DB search
MTKSELIEILSRRQPHLKAEDVDLAVKALLEMMGGALAQGDRIEIRGFGSFSLHYRPPRM
GRNPKTGESVALPAKHVPHFKPGKELRERVSDVTPIEEAGE
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatccgaactcatcgagatcctcagccgccgccagccgcacctcaaggccgag
gacgtggatctggccgtcaaggcgttgctggaaatgatgggcggcgcgcttgcccagggc
gatcgcatcgagatccgcggattcggcagtttttcgctgcattaccgtccgccgcgcatg
ggccgcaatcccaagacgggcgaatcggtcgcgttgccggccaagcacgttccccatttc
aagccgggcaaggagctgcgcgagcgcgtcagcgacgtcacgcccatcgaagaggcaggg
gagtag
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integrated database retrieval system
