Pseudoxanthomonas mexicana: H4W19_05165
Help
Entry
H4W19_05165 CDS
T06805
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
pmex
Pseudoxanthomonas mexicana
Pathway
pmex00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmex00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
H4W19_05165 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmex01007
]
H4W19_05165 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmex03016
]
H4W19_05165 (serS)
Enzymes [BR:
pmex01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
H4W19_05165 (serS)
Amino acid related enzymes [BR:
pmex01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
H4W19_05165 (serS)
Transfer RNA biogenesis [BR:
pmex03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
H4W19_05165 (serS)
Prokaryotic type
H4W19_05165 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Cep57_CLD_2
CCDC113_CCDC96_CC
DUF4530
KASH_CCD
IFT46_B_C
CENP-F_leu_zip
Motif
Other DBs
NCBI-ProteinID:
QND81166
LinkDB
All DBs
Position
complement(1076377..1077657)
Genome browser
AA seq
426 aa
AA seq
DB search
MLDPVLLRTQPAELAQRLKETRGFDLDVSRIADLEAARKQIQKRTEELQNLRNTRSKAIG
QAKAKGEDVSALMAEVAGFGDELKASEVKLDEIRAEIEGIALGIPNLPHASVPVGSDEAG
NVEQHRWGTPRTFDFPVKDHVELGARHGWLDADTAAKLSGARFTVLRGQLARLHRALAQF
MLDLHTNEHGYEETSVPVIVNADSMRGTGQLPKFEEDLFATQLGEHKRYLIPTSEVPLTN
IVRDEILDDARLPLRMTAHSMCFRSEAGSGGRDVRGMIRQHQFEKVELVSITRPSESYDE
QERMTRAAETVLEKLGLPYRRMLLCTGDMGFGAARTFDLEVWLPSQDTYREISSCSNCED
FQARRMQARWRNPATGKPEPVHTLNGSGTAVGRALIAVMENYQNADGSITVPEVLRPYMG
GTDRIA
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatcccgtcctgctccgcacccagcccgccgaactcgcccagcgcctcaaggaa
acccgcggtttcgacctggacgtgtcccggatcgccgacctggaagccgcccgcaagcag
atccagaagcgcaccgaggagctgcagaacctgcgcaacacccgttccaaggctatcggc
caggccaaggccaagggcgaggacgtgtccgcgctgatggcggaagtggccggcttcggt
gacgagctgaaggcctcggaagtgaagctggacgagatccgcgccgagatcgaaggcatc
gccctgggcatccccaacctgccgcacgccagcgtgccggtcggcagcgacgaggccggc
aacgtcgaacagcaccgctggggtaccccgcgcacgttcgatttcccggtgaaggaccac
gtggaactgggcgcccgccacggctggctcgacgccgacaccgccgccaagctgtccggc
gcgcgtttcaccgtgctgcgcggccagctggcccgcctgcaccgtgcgctggcgcagttc
atgctggacctgcacacgaacgaacacggctacgaagagaccagcgtgccggtgatcgtc
aacgccgattccatgcgcggcaccggccagctgccgaaattcgaggaagacctgttcgcc
acccaactgggtgagcacaagcgctacctcatcccgacctcggaggtcccgctgacgaac
atcgtccgcgacgagatcctcgacgatgcccgcctgccgctgcgcatgaccgcgcattcg
atgtgcttccgttcggaagccggcagcggcggccgcgacgtgcgcggcatgatccgccag
caccagttcgagaaggtggaactggtgtcgatcacgcgcccgtcggaaagctacgacgag
caggagcgcatgacccgcgccgccgagaccgtgctggaaaaactgggcctgccgtaccgc
cgcatgctgctgtgcacaggcgacatgggcttcggcgcggccaggaccttcgatctggaa
gtctggctgccgtcgcaggacacctaccgcgagatttcctcctgctcgaactgcgaggat
ttccaggcccgccgcatgcaggcgcgctggcgcaacccggccaccggcaagcccgagccc
gtgcatacgctcaacggctccggcaccgccgtcggccgtgcgctgatcgcggtgatggag
aactaccagaacgcggacggctcgatcaccgtgcccgaggtgttgcgtccgtacatgggc
ggcacggaccgcatcgcctga
DBGET
integrated database retrieval system
