Pseudoxanthomonas mexicana: H4W19_06670
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Entry
H4W19_06670 CDS
T06805
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pmex
Pseudoxanthomonas mexicana
Brite
KEGG Orthology (KO) [BR:
pmex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmex03016
]
H4W19_06670 (truB)
Enzymes [BR:
pmex01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
H4W19_06670 (truB)
Transfer RNA biogenesis [BR:
pmex03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
H4W19_06670 (truB)
Prokaryotic type
H4W19_06670 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
QND81435
UniProt:
A0ABX6RFG7
LinkDB
All DBs
Position
complement(1396499..1397446)
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AA seq
315 aa
AA seq
DB search
MAGRIHFRRLDGLLLLDKPQGMSSNAALQAARRLFRAEKGGHTGSLDPLATGLLPLCFGE
ATKIAGLLLGSRKAYDTVAVLGTTTDTDDADGMPLRERPVPPLDRATVQAALAPLLGRIR
QRAPIYSALKQGGEPLYAKARRGEAIEAPEREVEVHTIDLLDIAPGRIALRVECGSGTYV
RSLVRDLGETLGCGAHVGVLRRLWVEPFREPRMFSLEALLALARERGEAALDACLLPIEA
GLVGFPRVDVDAEDARRLGQGQRLRGQPPSDGPVTVHGPDGRVLGLATVDPAGVLAPQRL
FTWTAQAAIPAAGSQ
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcaggacgcatccacttccgtcgcctcgatggcctgctgctgctggacaagccgcag
ggcatgagctcgaacgccgccctgcaggcggcccggcggctgttccgtgcggagaagggc
ggccataccggcagcctcgatccgctcgccaccggcctgctgccgctgtgcttcggcgag
gcgaccaagatcgccggcctgttgctgggttcgcgcaaggcctacgacaccgtcgccgtg
ctcgggaccaccaccgatacggacgatgccgacggcatgccgctgcgcgagcgtcccgtg
ccgccgctggacagggcgaccgtgcaggcggcgctagcgccgctgctgggccgcatccgc
cagcgtgcgcccatttattcggccctcaagcaggggggagagccgctgtacgccaaggcg
cgccggggcgaagccatcgaagcgcccgagcgcgaggtagaggtccacacgatcgacctc
ctcgacatcgcgcccggtcgcatcgccctgcgggtggagtgcggctccggcacctacgtg
cgcagcctggtccgtgacctgggcgagacgttgggctgcggtgcccatgtcggggtgctg
cgccggctctgggtagagccgttcagggaaccccgcatgttctccctggaagcgctgctg
gcgctggctcgggaaaggggcgaggcggccctcgacgcctgcctgttgcccatcgaggcc
ggcctggtggggttcccccgcgtcgacgtggatgccgaagacgcccgccggctcgggcag
ggccagcgcctgcgcgggcagccgcccagcgacggacccgtgaccgtgcatggcccggat
ggccgcgtgctggggctggcgacggtcgatccggccggcgtgctggcgccgcagcgtctg
ttcacctggaccgcgcaggcggccatcccggcggccggcagccaataa
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