Pseudoxanthomonas mexicana: H4W19_06825
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Entry
H4W19_06825 CDS
T06805
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pmex
Pseudoxanthomonas mexicana
Brite
KEGG Orthology (KO) [BR:
pmex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmex03016
]
H4W19_06825 (truA)
Enzymes [BR:
pmex01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
H4W19_06825 (truA)
Transfer RNA biogenesis [BR:
pmex03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
H4W19_06825 (truA)
Prokaryotic type
H4W19_06825 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QND81464
LinkDB
All DBs
Position
complement(1428055..1428858)
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AA seq
267 aa
AA seq
DB search
MTRYALGVEYDGGGFLGWQRLSKSGTPDDTSTVQAALEGALSSVADAQVDTICAGRTDAG
VHAQCQVVHFDSDAARTPRGWLLGATARLPPAVCVRWCQPVADDFHARFSARARRYRYTL
VNRLARPALERQYLSWERMPLDADAMHRAAQVLVGENDFSAFRTVHCQSPHAMRNLHGIS
VVRQGERVVVEVQANAFLHHMVRNIVGSLLVVGRGERPEGWIGELLTGRDRTVAGPTAPP
DGLVFVSPLYPAEWGLPSEVTLPAAIG
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcgctacgcgctgggcgtcgagtacgacggcggcggtttcctgggatggcaacgg
ctgagcaagtccggcacgcccgacgacaccagcacggtgcaggcggcgctggaaggcgcg
ctgtcgtcggtggccgacgcccaggtggacacgatctgcgccggccgcaccgatgccggg
gtgcatgcgcaatgccaggtcgtccacttcgacagcgatgccgcgcgcacgccgcgcggc
tggttgctgggcgccacggcgcgcctgccgccggcggtctgcgtacgctggtgccagccc
gtggccgatgatttccatgcgcggttctccgcgcgcgcgcggcgctatcgctacacgctg
gtgaaccggctggcgcgcccggcgctggagcgccagtacctgagctgggaaaggatgccg
ctggacgccgacgccatgcaccgtgccgcccaggtgctggtcggcgagaacgatttcagc
gccttccgcaccgtgcactgccagtcgccgcacgcgatgcgcaacctgcacgggatctcc
gtcgtgcgccagggcgagcgcgtggtcgtcgaggtgcaggccaatgcgttcctgcatcac
atggtgcgcaacatcgtcggttcgctgctggtggtggggcgcggcgaacggccggagggc
tggatcggtgaactgctgaccggtcgcgaccgcactgtcgccgggccgactgcgccgccg
gacggcctggtgttcgtcagcccgctgtatccggccgaatggggcctgccgtcggaagtg
accctgcctgccgccatcggctga
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