Pseudoxanthomonas mexicana: H4W19_06895
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Entry
H4W19_06895 CDS
T06805
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pmex
Pseudoxanthomonas mexicana
Brite
KEGG Orthology (KO) [BR:
pmex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmex03009
]
H4W19_06895 (rimO)
Enzymes [BR:
pmex01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
H4W19_06895 (rimO)
Ribosome biogenesis [BR:
pmex03009
]
Prokaryotic type
ribosomal protein modification factors
H4W19_06895 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
YajR_YAM
PrmA
Motif
Other DBs
NCBI-ProteinID:
QND81476
LinkDB
All DBs
Position
complement(1442569..1443930)
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AA seq
453 aa
AA seq
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MSLQNPKVGFVSLGCPKALVDSERILTQLRVEGYDIVPTYDAADVVVVNTCGFIDSAVAE
SLDAIGEAMNQNGKVIVTGCLGKRPEQIREQYPDVLAISGPQDYQSVMEALHEALPPKHD
PFVDLVPDYGVKLTPRHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVDDVLREAERLVR
GGVKELLVVSQDTSAYGVDLKYAEREWRGKAYQTRMKALCEGLGELDAWVRMHYVYPYPH
VDDVVPLMAEGRVLPYLDIPFQHASPRILKLMKRPGAVDKALERVKRWRSICPDITLRST
FIVGFPGETDQEFEELLQFLDEAQLDRVGAFAYSPVEGAAANLLPDPVPEEVKQERLARF
MERQAEISAARLEAKIGTVQRCLVDLIEDDIAVARSKADAPEIDGLVHIQNGGEAGLRVG
QFVDVEITESDEHDLFGDAIVAATGRPLDVKVL
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgcagaaccccaaggtgggcttcgtcagcctcggctgcccgaaggccctggtc
gattccgagcgcatcctcacccagctccgcgtggagggatacgacatcgtgccgacctac
gacgcggcggacgtggtggtggtgaacacctgcggcttcatcgactccgccgtggccgag
tcgctggacgccatcggcgaggcgatgaaccagaacggcaaggtcatcgtcaccggctgc
ctgggcaagcgcccggaacagatccgcgagcagtaccccgacgtgctggcgatcagcggc
ccgcaggactaccagagcgtgatggaggcgctgcacgaagcgctgccgccgaagcatgac
cccttcgtcgacctggtgccggactacggcgtcaagctgacgccgcgccattacgcgtac
ctgaagatttccgaaggctgcaatcatcgctgcagcttctgcatcattccgtcgatgcgt
ggcgacctggtgtcgcggccggtcgacgacgtgctgcgcgaggccgagcggctggtgcgc
ggtggcgtgaaggaactgctggtggtctcgcaggacacctccgcctacggcgtggacctg
aagtacgccgaacgcgaatggcgcggcaaggcgtaccagacgcgcatgaaagccttgtgc
gaaggcctgggcgaactcgatgcctgggtgcgcatgcactacgtctatccttatccgcac
gtcgacgacgtggtcccgctgatggccgaaggcagggtgctgccttacctggacatccct
ttccagcacgccagtccgcgcattctcaagttgatgaagcgccccggcgccgtcgacaag
gcgctggagcgggtgaagcgctggcgctcgatctgcccggacatcaccctgcgttccacc
ttcatcgtcggcttccccggcgagacggaccaggagttcgaggagctgctgcagttcctc
gacgaagcgcagctggaccgcgtgggtgcgttcgcctattcgccggtggaaggcgcggcc
gcgaacctgctgccggacccggtgccggaagaggtcaagcaggaacgcctggcgcgcttc
atggagaggcaggcggagatttccgccgcacgcctcgaagccaagatcggcaccgtgcag
cggtgcctcgtggatctgatcgaagacgacatcgccgtggcgcgttccaaggcggatgcg
cctgaaatcgacggcttggtgcacatccagaacggcggcgaagccggccttcgcgtcggc
cagttcgtcgacgtggagatcaccgagagcgacgagcacgacctgttcggtgacgccatc
gtcgccgcgacaggcaggccgctcgacgtcaaggtgctgtga
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