Pseudoxanthomonas mexicana: H4W19_07730
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Entry
H4W19_07730 CDS
T06805
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pmex
Pseudoxanthomonas mexicana
Pathway
pmex00300
Lysine biosynthesis
pmex01100
Metabolic pathways
pmex01120
Microbial metabolism in diverse environments
pmex01230
Biosynthesis of amino acids
Module
pmex_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pmex00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
H4W19_07730 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmex01002
]
H4W19_07730 (dapE)
Enzymes [BR:
pmex01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
H4W19_07730 (dapE)
Peptidases and inhibitors [BR:
pmex01002
]
Metallo peptidases
Family M20
H4W19_07730 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
QND81620
LinkDB
All DBs
Position
complement(1624552..1625694)
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AA seq
380 aa
AA seq
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MSDVVELSCELIRRHSVTPDDAGCQQVLATRLSQWGFHCEHLRFGETDNLWATHGSGSPV
LVLLGHTDVVPPGPLDAWTSDPFVPTVRDGVLYGRGTADMKCSVAACTIALERFVDAHPD
HPGTVALLVTSDEEGPAHDGVKQVAALFRERGQRIDWCITGEPSSKEALGDLLRVGRRGT
LTGTLSVHGVQGHVAYPHKALNPIHKALPALDELAARQWDEGYETFPPTSLQISNIHAGT
GASNVIPGELQVVFNLRFNPSWTAEKLEQEIEGILRRHGVDYSIQWLRGGEPFYTPEGHL
RATARAVLGEFAGVPPEESTAGGTSDARFIAPLGAECIEVGPVNASIHKVDENIRVTDLE
ALPGLYQALVERLMLTRPAI
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatgtcgtcgaactgtcttgcgaactgatccgccgccattcggtgacgccggac
gacgccggctgccagcaggtcctggcgacccgtctgtcgcaatggggattccactgcgaa
cacctgcgcttcggcgagaccgacaacctctgggccacgcacggcagcggttcgccggta
ctggtgctgctgggccatacggacgtggtgccgccggggccgttggacgcgtggaccagt
gatccgttcgtgcccaccgtccgcgatggcgtgctctacgggcgcggtaccgccgacatg
aagtgcagtgtggccgcgtgcacgatcgcgctggagcgcttcgtcgatgcgcacccggat
catccgggcacggtcgcgctgctggtgacctcggacgaggagggtcccgcccacgacggc
gtgaagcaggtcgcggcattgttccgcgagcgcggccagcgcatcgactggtgcatcacg
ggcgagccgtcgtccaaggaagcactgggcgacctgttgcgcgtcggccgtcgtggcacc
ctgaccggtaccttgagcgtgcacggcgtgcagggccatgtcgcctatccgcacaaggcg
ctcaatcccatccacaaggcgttgcccgcgctggacgaactggccgcgcgccagtgggac
gaaggctacgagaccttcccgccgaccagcctgcagatctccaacatccacgccggcacc
ggcgccagcaacgtcatcccgggcgaactgcaggtggtgttcaacctgcgcttcaatccc
agctggacagcggagaagctggaacaggagatcgagggcatcctccgccgccatggggtc
gactacagcatccagtggctgcgcggcggcgagcccttctacacgccggaaggccacctg
cgggccacggcgcgcgcggtgctcggcgagttcgccggcgtgccgccggaagagagcacg
gccggcggcacctcggatgcccgcttcatcgcgcccctgggtgcggagtgcatcgaagtc
gggccggtcaatgccagcatccacaaggtcgatgagaacatccgcgtgacggatctcgag
gcgctgccgggcctgtaccaggccttggtggagcggctgatgctgacccggcccgccatc
tga
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