Pseudoxanthomonas mexicana: H4W19_08605
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Entry
H4W19_08605 CDS
T06805
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pmex
Pseudoxanthomonas mexicana
Pathway
pmex00521
Streptomycin biosynthesis
pmex00523
Polyketide sugar unit biosynthesis
pmex00525
Acarbose and validamycin biosynthesis
pmex00541
Biosynthesis of various nucleotide sugars
pmex01100
Metabolic pathways
pmex01110
Biosynthesis of secondary metabolites
pmex01250
Biosynthesis of nucleotide sugars
Module
pmex_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pmex00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
H4W19_08605 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
H4W19_08605 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
H4W19_08605 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
H4W19_08605 (rfbB)
00525 Acarbose and validamycin biosynthesis
H4W19_08605 (rfbB)
Enzymes [BR:
pmex01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
H4W19_08605 (rfbB)
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Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
QND81779
UniProt:
A0ABX6RFW7
LinkDB
All DBs
Position
complement(1813690..1814745)
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AA seq
351 aa
AA seq
DB search
MPTWLVTGGAGFIGGNFVLRAVASGANVVNLDALTYAGNLDTLASVEGNPLHVFVRGDIG
DRPLVARLLSEYRPDAVINFAAESHVDRSIDGPGTFVQTNVVGTLGLLESVRDHWKRLEG
GASEQFRFLHVSTDEVYGSLGDTGRFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPV
LTTHCSNNYGPYHFPEKLIPLIIARALAGEPLPVYGDGKNVRDWLFVGDHCRALRTILEK
GRVGETYNVGGNAEKQNLEVVHTICALLDERMPRADGKPRSSQITFVADRPGHDRRYAID
ASKLRDELGWEPEYTFEQGIAETVDWYLANQAWVKRVLDGSYRLERIGTAV
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
gtgccgacgtggctcgtcaccggcggagccggcttcatcggcggcaatttcgtcctgcgt
gcggtggcaagcggggcgaacgtggtcaatctcgacgctctgacctacgcaggcaacctc
gacacgctggcgtccgtcgaaggcaatccgctgcacgtgttcgtccgaggcgacatcggc
gatcgccctctcgtggcgcgcctgttgtcggagtaccggcccgacgcggtgatcaacttc
gcggccgagagtcacgtcgaccgctccatcgatggtccgggcaccttcgtccagaccaac
gtggtcggtacgctgggcctgctggaatccgtccgcgaccactggaagcgactggagggc
ggggcgagcgagcagttccgcttcctgcatgtgtccaccgacgaggtctacggctcgctg
ggcgataccggccggttcaccgagaccacgccgtatgcacccaattccccgtactcggcc
tcgaaggcggcttccgaccacctggtgcgcgcgttccatcacacgtatggcttgccggtc
ctgaccacccactgttcgaacaactacggcccctaccactttcccgagaagctcatcccg
ctgatcatcgcccgcgcgctcgccggggagccgctgccggtctatggcgacggcaagaac
gtccgcgactggctgttcgtcggcgatcattgccgggccctccgcaccatcctggagaag
gggcgcgtgggtgagacgtacaacgtcggcggcaatgccgagaagcagaacctcgaagtc
gtccacacgatctgcgcattgctcgatgaacggatgccgcgcgccgacgggaagccgcgc
agcagccagatcaccttcgtggccgatcgcccggggcacgaccgtcgttatgcaatcgac
gcgtccaagctgcgcgacgagctgggctgggagccggaatacacattcgagcagggcatc
gcggagaccgtcgactggtatctcgccaatcaggcctgggtgaagcgcgtgctggacggc
agctaccgcctcgaacgcatcggcacggccgtctga
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