Pseudoxanthomonas mexicana: H4W19_12020
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Entry
H4W19_12020 CDS
T06805
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pmex
Pseudoxanthomonas mexicana
Pathway
pmex03030
DNA replication
pmex03410
Base excision repair
pmex03420
Nucleotide excision repair
pmex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H4W19_12020 (polA)
03410 Base excision repair
H4W19_12020 (polA)
03420 Nucleotide excision repair
H4W19_12020 (polA)
03440 Homologous recombination
H4W19_12020 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmex03032
]
H4W19_12020 (polA)
03400 DNA repair and recombination proteins [BR:
pmex03400
]
H4W19_12020 (polA)
Enzymes [BR:
pmex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H4W19_12020 (polA)
DNA replication proteins [BR:
pmex03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
H4W19_12020 (polA)
DNA repair and recombination proteins [BR:
pmex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
H4W19_12020 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H4W19_12020 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QND79092
LinkDB
All DBs
Position
complement(2520295..2523057)
Genome browser
AA seq
920 aa
AA seq
DB search
MTRLVLIDGSSYLFRAFHALPPLTNAQGEPTGALFGVVNMLRATLKEKPDYVAFVLDASG
PTFRDELYPDYKANRPPMPEDLRAQVEPMIRIVQALGFPLLRVEGVEADDVIGTLALQGA
AQGMEVTISTSDKDFAQLVRPGVALVNTMSGSRLDSADAVVEKFGVRPEQIVDFLALMGD
TVDNVPGVEKCGPKTAAKWLGEYGSLAAIMDRAGEIKGKIGDNLRAALPRLPLNRELVTI
KTDVALDGGPDTLPLRERHVDELRELYARYGFNQALKELEGGSPDASAVAEKEPGRARGT
GRIATTAPDEAVDPALGAAGEYTAVTTPEQLEALVAQLRAADEFAFDTETDSLDPMQANL
VGLSFATRTGQAVYVPVGHDYPGAPPQLDRAAVLAALSPVLSDAGRRKLGQHGKYDLHVL
RRHGVDVQGYADDTMLESFVLNSGSNRHDMDSLARRFLGYDTIKYEDVAGKGAKQIPFSQ
VAVDDATRYAAEDADITLRLHRVIAPRLAAEPGLERVYRDIEMPLVPVLARIEANGVMID
GDELRRQSADLSKRMLAAQQKATELAGRTFNLDSPKQLQALLFDELKLPVLVKTPTGQPS
TNEEALEAIADQHELPRVILEYRGLAKLRSTYTDKLPEMVNPDTGRVHTSYHQAGAATGR
LSSTDPNLQNIPIRTDDGRRIRKAFVAPPGRKLVACDYSQIELRIMAHLSQDPGLVRAFE
SGADIHKATAAEVFGRKLEEVTANERRAAKAINFGLMYGMSAFGLARQLGIGRGEAQDYI
ALYFSRYPGVRDYMERTRQQAREHGYVETVFGRRLYLEYINKGTQGQRAGAERAAINAPM
QGTAADIIKRAMIGVDAWLADHRNQALMILQVHDELVFEADAGFVPELLAEATSRMAAAA
QLSVPLVVDSGVGDNWEEAH
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgacacgactcgtactgatcgacggctccagctacctgttccgcgcattccatgcgctg
cccccgctcaccaacgcgcagggcgagccgaccggtgcgctgttcggcgtggtcaacatg
ctgcgcgccacgctgaaggaaaagccggactacgtggccttcgtgctggacgccagcggc
ccgaccttccgcgacgaactctatcccgactacaaggcgaaccggccgcccatgcccgag
gacctgcgcgcgcaggtcgaaccgatgatccgcatcgtgcaggcgctgggattcccgctg
ctgcgcgtggagggggtggaagccgacgacgtgatcggcacgctggcgctgcagggcgcg
gcacagggcatggaggtcaccatctccaccagcgacaaggatttcgcccagctggtgcgg
ccgggcgtggcgctggtcaacacgatgagcggcagccgtctggactccgccgacgccgtg
gtcgagaaattcggcgtgcgccccgagcagatcgtcgacttccttgccctgatgggcgac
acggtggacaacgtgcccggggtggagaagtgcgggcccaagacggccgccaagtggctg
ggcgaatacggctcgctggccgcgatcatggacagggccggcgagatcaagggcaagatc
ggcgacaacctgcgcgccgcgttgccgcgcctgccgctgaatcgcgagctggtcaccatc
aagacggacgtggcgctggacggcggtccggacacgctgccgttgcgcgaacgccatgtc
gacgagctgcgcgagctgtacgcacgttacggcttcaaccaggcgctgaaggaactggaa
ggcgggtcgcccgatgcatccgccgtggccgagaaggagccgggtcgcgcgcgcggtacc
ggacgcatcgccacgacggcgccggacgaagccgtcgacccggcgctgggcgctgccggc
gagtacaccgccgtgaccacgccggagcagctggaggcgctggtggcgcagttgcgcgcc
gcggacgagttcgccttcgacaccgagaccgacagcctggatccgatgcaggccaacctg
gtgggcctgagcttcgccacccggaccggccaggcggtgtacgtgccggtcgggcacgac
tacccgggtgcgccgccgcagctggatcgcgccgcggttctcgccgcgctgtccccggtg
ctgtccgacgcaggccgtcgcaagctgggccagcacggcaagtacgacctgcacgtgctg
cgccgccatggcgtggacgtgcagggctatgccgacgacacgatgctggagagcttcgtg
ctgaactccggcagcaaccgccacgacatggacagcctggccaggcgcttcctcggctac
gacaccatcaaatacgaagacgtggccggcaagggcgcgaagcagatcccgttctcgcag
gtggccgtcgacgacgccacccgctacgccgccgaggacgccgacatcaccctgcgcctg
caccgcgtgatcgcgccgaggctggcggcggagcctggcctggagcgcgtgtaccgcgac
atcgaaatgccgctggtgccggtgctggcccgcatcgaggccaacggcgtgatgatcgac
ggcgacgaactgcgccggcagagcgccgacctgtccaagcgcatgctcgcggcgcagcag
aaggccaccgagctggcgggccgcaccttcaacctggactcgcccaagcagctgcaggcc
ctgctgttcgacgaactgaagctgccggtgctggtgaagacgccgaccggccagcccagc
accaacgaggaggcgctggaagccatcgccgaccagcacgaactgccgcgggtgatcctg
gaataccgcggtctggccaagctgcgcagcacctacaccgacaagctgccggagatggtc
aatccggacaccggtcgcgtgcacaccagctaccaccaggccggcgcggcgaccgggcgg
ctgtcctcgaccgatcccaacctgcagaacatcccgatccgcaccgacgacgggcgccgg
atccgcaaggccttcgtggcaccgccaggccgcaagctggtggcctgcgactactcgcag
atcgagctgcgcatcatggcccacctgtcgcaggacccgggcctggtgcgcgcgttcgaa
tccggcgccgacatccacaaggcgacggcggcggaagtgttcggccgcaagctggaagag
gtcaccgccaacgaacgccgcgccgccaaggcgatcaacttcggcctgatgtacggcatg
agcgcgttcgggctggcgcgccagctggggatcgggcgtggcgaagcgcaggactacatc
gcgctgtacttcagccgttaccccggcgtgcgcgactacatggaacgcacgcgccagcag
gcgcgcgagcacggctatgtcgaaaccgtgttcggccgccgcctgtacctggagtacatc
aacaagggcacccaggggcagcgtgccggcgccgagcgcgcggcgatcaacgcgcccatg
cagggcacggcggcggacatcatcaagcgcgcgatgatcggcgtggatgcgtggcttgcg
gatcaccgcaaccaggcgctgatgatcctgcaggtgcacgacgaactggtgttcgaagcc
gacgccggtttcgtgccggaactgctggccgaagcgacttcacggatggccgccgccgcg
caactgagcgttccgctggtggtcgacagcggggtgggagacaactgggaagaggcccat
tga
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