Pseudoxanthomonas mexicana: H4W19_12035
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Entry
H4W19_12035 CDS
T06805
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pmex
Pseudoxanthomonas mexicana
Pathway
pmex03420
Nucleotide excision repair
pmex03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H4W19_12035 (uvrD)
03430 Mismatch repair
H4W19_12035 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmex03400
]
H4W19_12035 (uvrD)
Enzymes [BR:
pmex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H4W19_12035 (uvrD)
DNA repair and recombination proteins [BR:
pmex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H4W19_12035 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
H4W19_12035 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
DUF3553
Motif
Other DBs
NCBI-ProteinID:
QND79095
LinkDB
All DBs
Position
complement(2523999..2526191)
Genome browser
AA seq
730 aa
AA seq
DB search
MDVSHLLDDLNPAQRDAVSAAPGHYLVLAGAGSGKTRVLTHRIAWLNEVHGVPAHGILAV
TFTNKAAGEMRARADVQLRNGSRGMWIGTFHGLAHRLLRLHWQEAKLPETFQVLDSDDQQ
RLVKRVVQAMELDEGKYPPKQLTWWINEQKDEGRRPEHIQPAPNDDWLDVRRQVYAGYQE
RCDRAGLVDFAELLLRAHELLRDTPALLAHYRMRFREILVDEFQDTNAIQYAFVRVLAGD
TGHVFVVGDDDQSIYGWRGAKVENMQQFLRDHPSARTIRLEQNYRSSANILGAANAVIAH
NPGRIGKQLWTDTGDGEPIDLYAAYNEMDEARFVVERIRQWVRDGGSLGDAAILYRSNAQ
SRAFEEALLSEQLPYRVYGGMRFFERAEIKDALAYLRLVANRGDDAAFERAVNTPARGIG
ERTLDEVRRLARNARVSLWGAAMLATQGTELAGRARNALAAFMALVEQLAGETAELDLAE
RVDHVLVRSGLREHWAKESRGGLDSESRTENLDELVSVASRFVRRIDDDEATEGMSELVA
FLSYAALEAGEGQVEAGEDGVQLMTLHSAKGLEFPLVFLAGLEEGLFPSNRSLDESGRLE
EERRLAYVGITRARQKLVLTYAEARRLHGQDMYGIPSRFLREIPASLLNEVRPRVQVSRP
ASGFATRPAPGHASLETPGLKLGQTVTHAKFGPGVVTDYEGSGAHARVQVNFANEGSKWL
VLAYANLHAV
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggatgtctcccacctgctcgatgatttgaatcccgcccagcgcgacgccgtctcggcc
gcgcccgggcattacctggtgctggccggcgccggttccggcaagacccgcgtgctgacc
caccgcatcgcctggctgaacgaggtgcacggcgttcccgcccacggcatcctagcggtg
accttcaccaacaaggccgctggcgagatgcgcgcgcgcgccgacgtgcagctgcgcaat
ggcagccgcggcatgtggatcggcaccttccatggtctggcgcaccgcctgctgcgcctg
cactggcaggaggcaaagttgcccgaaaccttccaggtgctggacagcgacgaccagcag
cggctggtgaagcgtgtggtgcaggcgatggagctggacgagggcaagtatccgcccaag
cagctcacctggtggatcaacgaacagaaggacgagggccgccggcccgagcacatccag
ccggcgccgaacgacgactggctggacgtgcgccggcaggtctacgccggctaccaggag
cgctgcgaccgcgccggactggtggatttcgccgaactgctgctgcgcgcgcacgagctg
ctgcgcgacacgccggccctgctggcgcactaccgcatgcgcttccgcgaaatcttggtg
gacgagttccaggacaccaacgccatccagtacgccttcgtgcgcgtgctggccggcgac
accgggcacgtgttcgtggtcggcgacgacgaccagagcatctatggctggcgtggcgcg
aaagtcgagaacatgcagcagttcctgcgcgaccatccctccgcgcggaccatccggctg
gagcagaactaccgttccagcgccaacatcctgggcgcggccaacgcggtgatcgcgcac
aatcccggccgtatcggcaagcagctgtggaccgataccggcgatggcgagccgatcgac
ctgtacgccgcctacaacgagatggacgaagcacgcttcgtcgtcgagcgcatccgccaa
tgggtgcgcgacggcggcagcctgggcgacgccgccatcctctaccgcagcaacgcgcag
tcgcgcgcgttcgaagaagcgctgctgtcggaacagctgccgtaccgcgtgtatggcggc
atgcgcttcttcgagcgtgccgaaatcaaggacgcgctggcctacctgcgtctggtggcc
aaccgtggggacgatgccgccttcgagcgcgcggtcaacacgccggcacgcggcatcggc
gagcgcacgctggacgaagtgcgccgtctcgcacgcaacgcgcgcgtgtcgctgtggggc
gcggccatgctggccacgcagggcacggagctggccgggcgcgcacgcaacgcactggcc
gccttcatggcgctggtcgagcagctggcgggcgaaaccgccgaactcgacctggcagag
cgcgtggaccacgtactggtccgatcgggcctgcgcgagcactgggcgaaggaaagccgc
ggtggactggattccgaatcgcgcaccgaaaacctggacgagctggtgtcggtcgcctcg
cgcttcgtgcgccgcatcgacgacgacgaagcgacggaaggcatgagcgaactggtcgcc
ttcctctcctacgccgcgctggaagccggcgaaggccaggtggaggccggcgaggacggc
gtgcagctgatgacgctgcactcggccaagggcctggagtttccgctggtgttcctggcc
ggcctggaagaggggctgttccccagcaaccgttcgctggacgagagcggccggctggaa
gaggagcggcgcctggcctacgtgggcatcacccgcgcccggcagaagctggtcctgacc
tatgccgaggcgcgccgcctgcacggccaggacatgtacggcattccgtcgcgcttcctg
cgcgagatcccggcgagcctgctcaacgaagtgcgcccgcgcgtgcaggtcagccggccg
gcctccggcttcgccacccgtcccgcgcccggtcatgccagcctggaaacaccgggactc
aagctgggccagaccgtcacccatgccaagttcgggccgggcgtggtgaccgattacgag
ggcagcggggcgcacgcgcgcgtgcaggtcaatttcgccaacgagggcagcaagtggctg
gtgctggcctacgccaacttgcatgccgtctag
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