Pseudoxanthomonas mexicana: H4W19_13375
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Entry
H4W19_13375 CDS
T06805
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pmex
Pseudoxanthomonas mexicana
Pathway
pmex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H4W19_13375 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmex03400
]
H4W19_13375 (recC)
Enzymes [BR:
pmex01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
H4W19_13375 (recC)
DNA repair and recombination proteins [BR:
pmex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H4W19_13375 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QND79340
LinkDB
All DBs
Position
2845964..2849263
Genome browser
AA seq
1099 aa
AA seq
DB search
MTADAAPDFRLYPSNALELLAALLAEELRNPVPGQSPLAPDVVLIPQVAMRRWLQATLAT
RYGVAANLEFLTPGEFVARALDANLGPSTDDLDMAALQWRLYGALGDPTLRGTPAMASLD
AWLGDGDPLKPWALAGELAGVYEKYQAWRRDWLLRWEAGADQDDAQARLWRAVAAGRDYR
ARRIHDYLARFGRDDGPLPQGLPKRLLVFATLNISPDVLRVLATQARVGTLHFYLPTPAR
GYWGDLQTLRERRRSGDSALFADDVQENPLLQAWGAAGRDFMALLGDYEVVHPRAEIDVY
ADPLSAQGPDTLLRRLQSDLFHRCAPAVPPPRTALDLADASLQVHACHTRLRELQVLHDQ
LRALLDDPRFDPPLQPREIAVLAPDIDPYVPYLDAVFGGTGHDDALPWALADTSPLASEP
LAEVFLRLLDLPVSRFGLDEVLDLLASAPMAEASGLDSDAIDRLHGWLREAGARWGLDAA
HRVASDAPADDAYTWQFALDRLLLGHASGSEDEIAGVAPWPELEGSGLDALDTLVRLLRE
LARQRRVLGEAQTPTRWRERLLHLLDALLPERPAAPRAQRALDRLRTLIDRFARDAEAAG
YGGTVPPEVVRAHFADLLSQADTRAPLLTGGISVGRMVPMRLLPFRVICLLGMNDGDFPR
RDPAAGLNKLTAELHAGRRLPGDRSTREDDRFLFLQLFAAAQDVFYLSYLGNDPRDGSVR
EPSVLVSELLDVAARYHADPGARTRLVVRHTLQPFAPEAFGSDDEPRRFSYRARWREAGQ
RLGEARHALAPWLLQPLPPKDADTTDLSLDALRRFFADPQGRFLQQRLGLRLPEPVDQGE
DVEPLVVPGRGLERARLQQALVDAMDAGQEAGLRERLRARALLPSGALGTRQFEAMLTQA
SPFARARRAWLAGETAASAAYAIELDGLRLHGRVADVTARGLVRLRADVLNGSAALRWGL
DWLLANAAGARLPLVQFHDGDHPGPHLTEALAPEQARTALRCLLALHARGLQAPLLFAPS
TGWDIWNAEPGKRRAAGWKRWHGDGNGGWAEGEGEAIRLALRGRDPFARDDDYAELERTS
LDVYDLLRHGRTRHDGGAA
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgacgccgcgcccgacttccgcctgtatccctccaacgcactggagctgctt
gcggcgttgctggccgaggagctgcgcaatccggtgccgggccagtcgccgcttgcgccg
gatgtcgtgctgatcccccaggtggcgatgcggcgttggctgcaggccacgctggcgacc
cggtatggtgtggccgccaacctggaattcctcacccccggcgagttcgtcgcccgcgcg
ctggacgccaatctcggtccgagcaccgacgacctggacatggccgccctgcagtggcgc
ctgtacggcgcgctgggcgatccgacgctgcgcggcacgcccgcgatggcgtcgctggac
gcctggctgggcgacggcgacccgctgaagccctgggcgctggccggcgaactggccggc
gtgtacgagaagtaccaggcctggcgccgcgactggctgctgcgctgggaagcgggcgcc
gaccaggacgacgcccaggcgcgactgtggcgcgcggtcgccgccgggcgcgactaccgt
gcacgccgcatccacgactacctcgcgcgcttcggccgcgacgacggcccgctcccgcag
ggcctgccgaaacgcctgctggtgttcgccaccctcaacatctcgcccgacgtgctccgc
gtgctggccacccaggcgcgcgtgggcacgctgcatttctacctgcccacgccggcgcgc
ggctattggggagacctgcagacgctgcgcgagcgccgccgcagtggcgacagcgctttg
ttcgccgacgacgtgcaggagaacccgctgctgcaggcctggggcgccgccggccgcgac
ttcatggcgctgctgggggactacgaagtggtgcacccgcgcgccgagatcgacgtctac
gccgatccgctgtccgcgcagggccccgacacgctgctgcggcgcctgcagtcggacctg
tttcaccgttgtgcgccggccgtgccgccgccgcgcaccgcgctcgacctggccgatgcc
agcctgcaggtccacgcctgtcacacccgcctgcgcgagctgcaggtgttgcacgaccag
ctgcgcgccctgctggacgacccgcgcttcgatccgccgctgcagccgcgcgagatcgcg
gtgctggcgccggatatcgatccgtacgtgccctacctggatgcggtgttcggcggcacc
ggccacgacgatgcgctgccctgggcgctggccgataccagcccgctggcgagcgaaccg
ctggccgaggtgttcctgcgcctgctggacctgccggtgtcgcgcttcgggctggatgag
gtgctcgacctgctggccagcgcgcccatggccgaagcctccgggctggacagcgacgcc
atcgaccgcctgcatggctggctgcgcgaggcaggtgcgcgttggggcctggatgccgcg
caccgcgtcgcctccgatgcgccagccgacgacgcctacacctggcagttcgcgctggac
cgtctgctgctgggccatgcgagcggcagcgaagacgagatcgccggtgtcgcgccctgg
ccggagctggaaggcagcggcctggacgcgctcgatacgctggtgcgcctgctgcgcgaa
ctcgcccgccagcggcgcgtgctcggcgaagcacagacgcccacacgatggcgcgagcgc
ctgctgcacctgctcgacgcgttgttgccggaacggccggccgcaccgcgcgcgcaacgc
gcgctggaccgcctgcgcaccctcatcgaccgcttcgcccgcgacgcggaggccgccggc
tatggcggtaccgtgccgccggaggtggtgcgcgcgcacttcgccgacctgctgtcgcag
gcggacacgcgcgcaccgctgctgaccggcggcatcagcgtgggccgcatggtgccgatg
cgcctgctgccattccgggtcatctgcctgctgggcatgaacgacggcgacttcccccgg
cgcgatcccgccgccggcctcaacaagctgaccgccgaactgcatgcgggacggcgcctg
cccggcgaccgttcgacgcgggaggacgaccgtttcctgttcctgcagctgttcgccgcc
gcgcaggacgtgttctacctcagctacctcggcaacgacccgcgcgatggcagcgtgcgc
gagccgtcggtgctggtcagcgaactgctcgacgtcgccgcgcgctaccacgccgatcct
ggcgcgaggacgcgactggtcgtgcgccacacgctgcagccgttcgcgccggaggcgttc
ggcagcgacgatgaaccacgccgcttcagctaccgtgcgcgctggcgcgaggccggccag
cgtctgggcgaagcacgacacgccctggcgccctggctgttgcagccgctgccgccgaag
gacgccgacacgaccgacctgtcgctcgacgcgctgcggcgcttcttcgcagatcctcag
gggcgcttcctgcaacagcgcctgggtctgcgcctgcccgagccggtcgaccagggcgaa
gatgtcgagccgctggtcgtccccggtcgcgggcttgaacgcgcgcggctgcagcaggcg
ctggtcgacgcgatggatgccggccaggaagccggcctgcgcgagcgcctgcgtgcacgc
gcgctgctgccatcgggtgcgctcggcacccgccagttcgaggccatgctgacgcaggcg
tctccgttcgcgcgggcgcgtcgcgcgtggctggcgggcgagacggcggcatctgcggct
tatgccatcgagctcgatggccttcgcctgcacggccgcgtcgccgacgtgaccgcgcgc
gggctggtgcgcctgcgcgcggacgtactcaacggcagcgcagcgctgcgctggggattg
gactggctgctggccaatgcggcgggtgcgcgcctgccactggtgcagttccacgacggc
gaccacccggggccgcatctgaccgaggcgctggcgccggagcaggcgcgcacggcattg
cgctgcctgctggccctgcacgcgcgaggcctgcaggcgccactgctgttcgccccgtcc
accggctgggacatctggaacgccgagcccggaaagcgccgcgccgccggctggaagcgc
tggcacggcgatggcaacggcggttgggcggaaggcgagggcgaggcgatccggctcgcc
ctgcgcggtcgcgatccctttgcgcgcgacgacgactatgccgaactggagcgcaccagc
ctggacgtctacgacctgcttcgccacggccgtacgcgccacgacggaggtgcggcatga
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