Pseudoxanthomonas mexicana: H4W19_13380
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Entry
H4W19_13380 CDS
T06805
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
pmex
Pseudoxanthomonas mexicana
Pathway
pmex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H4W19_13380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmex03400
]
H4W19_13380
Enzymes [BR:
pmex01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
H4W19_13380
DNA repair and recombination proteins [BR:
pmex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H4W19_13380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PDDEXK_1
AAA_11
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QND79341
LinkDB
All DBs
Position
2849260..2852904
Genome browser
AA seq
1214 aa
AA seq
DB search
MSAPGLAEEPYLARALDGVQLIEASAGTGKTYTLATLFTRLIVEQRLRMGQVLAVTYTEA
ATQELRKRIRERLALAANVIGMPVRDDEDHEIALTRFILDRHLAGGTETPAQLARRLRTA
VEETDLAAIFTIHGFCARVLREHALEAGQGLAAVELLGNARDLYAEVAADLWRVHAADPE
TADALIGLWKDPDTLAEDLPALCKPLPLYPVAPAEGDEEWQVAVDATRAGRAAHLVEAIG
LYLAEARAVIAAAFDAKVFDGRRARRPSFDKAFDELQAGAVLADWPRTDKTHLQKLLPDA
LLGYCKEGQEARVPVSPLFDALRDWCEADDAWQQMQLARRAALLHRLRDEARQRLQLLKR
TRRVQTYDDLIDRVADALAGGPETLTLVSRLRAQYRIALVDEFQDTDERQWQIFARVFGD
SDAVRAIGDVPALFLIGDPKQAIYGFRGGDVATYLSAKHHPATVHADPLTHNFRSRPAVL
RAVQALYAGAAAAGQEAFAHPGIHFEAVEPGGAQRDDHYLRDGTPAPALTLRLLRGDAGP
LDADASREAAVAACVADIHAVLSAARGDRALIRGRRVQPGDIAVLVRNHKEATRVQQALA
RAGVPAVAAGRQSLFETAEAGELRTLLLALLHPSDSGRLRAALSTVLFGQDAAAIAALED
GGDAQRDHQAKLLHWRERWQRSGPFALVSELCAEQATRLLGLLDGERRLTNYLQLGEHLQ
EAAARTLGLQGLLDWLQMRIARADPGDEAQLLRLESDALRVQIVTLHKSKGLEYPLVYLP
FAGLGTHRPDTSRHRIVHDDDGLRVLQWKIDKEDAAWKAAGEAARRDAIAEDARLLYVGL
TRAAHALWIAAGDVKDFDRSRLAPLLAGIADLRAQADVRIVEGPAEPPPPRLAQDGATVV
APARTARGRVAADWWVYSFTQLAHAEGADPLAAATQADPGGEDEAPASDADVLPDAAVTP
LVQADPRFAGSRFGVVMHAALENADFAAWRDWQPGDPAPDGQADVIVQALHEGGYAEADI
EDGLAVLVPLVGQTLCTTLPEGVRLADVPAASRRAEIEFHFAMQPTAVPALLALLHRHGL
LRHRSAFGTRARLEGLMTGLIDLTYGHDGRWYVLDYKSNQLPAYDAAAMQQAMAHSEYDL
QALIYTLALHRWLRFRLGDAYDYARDFGGIRYLFCRGLDLTQPRSPGVHAQRFAPELVQA
LDALFAGHATEAGA
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcccccggcctggcggaggagccttacctggcgcgcgccctggacggcgtgcaa
ctgatcgaggccagtgccggtaccggcaagacctacacgctggcgacgctgttcacccgc
ctgatcgtcgaacagcggctgcgcatgggccaggtgctggcggtgacctataccgaagcc
gccacccaggagctgcgcaagcgcatccgggagcggctggcgctggccgcgaacgtgatc
ggcatgccggtgcgggacgacgaggaccatgagatcgcgctgacgcgcttcatcctggat
cgccatctcgccggcggcaccgagacgccggcgcagctggcgcgccgcctgcgcaccgcg
gtggaggaaaccgacctcgccgccatcttcaccatccacggcttctgcgcccgcgtgctg
cgcgaacatgcgctggaagcggggcagggcctggccgccgtcgaactgctcggcaacgcg
cgcgacctgtatgccgaggtcgccgccgacctctggcgcgtgcatgccgccgatccggag
accgccgacgccctcatcggcctgtggaaggatcccgacaccctggccgaagacctgccc
gcactgtgcaagccattgccgttgtatccggtggcgccggcggaaggggatgaggaatgg
caggtcgccgtcgatgcgacacgtgcgggacgtgccgcgcacctggtcgaggcgatcggc
ctgtacctggcggaggcgcgcgccgtgatcgcggcggcgttcgacgccaaggtgttcgat
ggccgccgcgcgcgccgaccgagcttcgacaaggcgttcgacgagctgcaggccggtgcc
gtcctcgccgattggccgcgcaccgacaagacgcacctgcagaagctgctgccggacgcc
ctgctgggctactgcaaggaagggcaggaggcgcgcgtgccggtatcgccgctgttcgac
gccctgcgcgactggtgcgaagccgacgatgcctggcagcagatgcaactcgcccggcgt
gccgcgctgctccaccgcctgcgcgacgaagcgcggcagcgcctgcagctgctcaagcgc
acgcggcgcgtgcagacctacgacgacctgatcgaccgcgtcgccgacgccctggctggc
ggtccggagacgctgacgctggtgtcccggttacgcgcgcagtaccggatcgcactggtc
gacgagttccaggacacggacgagcgccagtggcagatcttcgcccgcgtgttcggcgat
tccgacgccgtccgtgcgatcggcgacgtgcccgccctgttcctgatcggagatccgaag
caggccatctacggcttccggggcggcgatgtcgccacgtacctgtccgccaagcaccat
cccgccaccgtccacgccgatccgctgacccacaacttccgctcgcgacctgccgtgctg
cgcgcggtgcaggcgctgtacgccggcgcggcggcggcggggcaggaggccttcgcgcat
cccggcatccacttcgaggcggtcgagcccgggggtgcgcagcgcgacgaccattacctg
cgcgatggcacgcccgcaccggcactgacgctgcggctgctgcgcggtgatgctggaccc
ctcgacgctgacgcctcgcgggaagccgccgtcgccgcctgcgtggcggacatccacgcc
gtcctctccgcggcccgcggggatcgcgccctgatcaggggtcggcgcgtgcagcccggc
gacatcgccgtgctggtgcgcaaccacaaggaggccacgcgtgtgcagcaggccctggcg
cgcgccggcgtgccggcggtcgctgcgggcaggcagagcctgttcgagaccgccgaggcc
ggcgagctgcgcaccctgctgctcgccctgctgcatccctccgacagcggccggctgcgt
gcggcactgtccacggtgctgttcggccaggacgccgccgccatcgccgccctggaagac
ggaggcgatgcgcagcgcgatcaccaggcgaagctgctgcactggcgcgaacgctggcag
cgcagcggcccgttcgcactggtgtccgaactgtgcgccgaacaggccacgcggctgctc
ggcctgctggacggcgagcggcggctgacgaactacctgcaactgggcgagcacctgcag
gaggccgccgcccgcacgctgggcctgcagggtctgctcgactggctgcagatgcgcatc
gcccgtgccgatcccggcgacgaagcgcagctgctgcggctggaaagcgatgcgctgcgt
gtgcagatcgtcaccctgcacaagagcaagggcctggaatatccgctggtctacctgccg
ttcgccgggctgggcacccaccgtcccgacaccagccgccaccgcatcgtgcatgacgac
gatggccttcgcgtgctgcagtggaagatcgacaaggaggatgccgcatggaaagcggcc
ggtgaggcggccaggcgcgatgccatcgccgaggatgcgcggctgctctatgtcggtctg
acccgtgcggcgcacgcgctgtggatcgcggcgggcgatgtgaaggatttcgacaggagc
cgccttgcgccattgcttgccggcatcgccgacctgcgcgcgcaggccgatgtgcgcatc
gtcgaaggacctgccgagccgccgccgccgcgcctggcgcaggacggtgcgaccgtcgtc
gcgccggcccgcaccgcacgcggccgcgtcgccgccgactggtgggtctacagcttcacc
cagctcgcgcatgccgaaggcgccgatccgctggctgccgccacccaggccgatcccggc
ggcgaagacgaagcgcccgcgtccgatgccgacgtactgcccgatgcggccgtcacgcct
ttggtgcaggccgatccgcgcttcgccggcagccgcttcggcgtggtgatgcacgccgcg
ctggagaacgcggacttcgctgcatggcgcgactggcagccgggcgatcccgcgcccgac
ggccaggccgatgtcatcgtgcaggccctgcacgaaggcggctacgccgaagccgacatc
gaggacggcctcgcagtgctggtgccgctggtgggacagacgctgtgcaccacgctgccg
gaaggcgtgcgcctggccgacgtgccggcggcgtcgcgccgcgcggaaatcgagttccac
ttcgccatgcagcccaccgccgtgccggcgctgctggcgctgctgcatcggcacggcctg
ctgcgccatcgcagcgccttcggcacgcgcgcgcggctggagggcctgatgaccggcctg
atcgacctcacctacggccacgacggccgctggtacgtgctcgactacaagtcgaaccag
ctgcccgcctacgacgcggcggcgatgcagcaggcgatggcgcacagcgagtacgacctg
caggcgctgatctacacgctggcgttgcaccgctggctgcgcttccgcctgggtgatgcc
tacgactacgcacgcgacttcggcggcatccgctacctgttctgccgtgggctggatctg
acccagccacggtcgcccggggtgcatgcgcaacgcttcgcgcccgagctggtgcaggcg
ctggacgcgctgttcgccggccatgcgacggaggccggtgcatga
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